Job Description P0ADT5 Confidence 44.20% Date Thu Jan 5 11:21:48 GMT 2012 Rank 88 Aligned Residues 277 % Identity 15% Template c3k1tA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamate--cysteine ligase gsha; PDBTitle: crystal structure of putative gamma-glutamylcysteine synthetase2 (yp_546622.1) from methylobacillus flagellatus kt at 1.90 a3 resolution Resolution 1.90 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	T	W	S	F	V	R	Q	S	W	L	T	H	Q	P	S	L	Y	S	R	L	D	L	A	W	D	G	T	G	E	P	K	L	L	E	N	N	A	D	T	P	T	S	L	Y	E	A	A	F	F	Q	W	I	W	L	E	D	Q	L	N	A	G	N	L	P	E	G	S	D	Q	F	N	S	L	Q	E	K	L	I
Query Conservation
Alig confidence																													.	.		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	I	E	H	W	F	R	S	Q	W	Q	E	Y	G	A	P	F	Y	A	S	V	D	L	R	N	A	.	.	G	.	F	K	L	A	P	V	D	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	P	G	G	F	N	N	L	N	P	D	F	L	P	L	C	I	Q	A	A	X
Template Known Secondary structure																			S										.	.	S	.	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S				G	G	G	S		G	G	G
Template Predicted Secondary structure																													.	.		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.		.	.	.	.	.	.	60	.	.																			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.															.	.	.	.	.	.	.	220
Predicted Secondary structure																																																	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	F	V	E	L	R	E	Q	Y	G	F	Q	L	L	H	L	T	C	C	R	D	T	V	E	D	R	G	T	I	Q	Y	L	Q	D	C	A	T	E	A	E	I	A	T	E	F	L	.	.	.	.	.	Y	I	D	D	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	E	K	G	Q	F	T
Query Conservation																																																	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	V	E	K	I	C	P	D	A	R	R	L	L	L	I	P	E	N	H	T	R	N	T	F	Y	L	R	N	V	H	A	L	T	H	I	L	R	Q	A	G	L	E	V	R	I	G	S	I	A	P	E	I	T	A	P	T	F	L	E	T	H	D	G	H	S	I	L	L	E	P	V	R	R	K	A	N	R	L	E
Template Known Secondary structure								S	T	T		S								S		S	S																		T	T										T	T			S							S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.									.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																											.															.	.	.	.	.	.	.	.
Query SS confidence																																											.															.	.	.	.	.	.	.	.
Query Sequence		D	L	Q	D	Q	V	I	S	N	L	F	K	L	Y	P	W	E	F	M	L	R	E	M	F	S	T	K	L	E	D	A	G	V	R	W	L	E	P	A	W	K	.	S	I	I	S	N	K	A	L	L	P	L	L	W	E	.	.	.	.	.	.	.	.	M	F	P	N	H	P	N	L	L	P	A	Y	F	A	E	D
Query Conservation																																											.															.	.	.	.	.	.	.	.
Alig confidence		.																.	.	.	.																						.															.	.	.	.	.	.	.	.
Template Conservation		.																.	.	.	.
Template Sequence		.	L	D	N	F	D	S	C	A	I	L	L	N	N	D	L	.	.	.	.	S	G	G	I	P	D	I	L	Q	G	L	E	Q	S	L	I	P	P	L	H	A	G	W	A	T	R	R	K	S	N	H	F	T	A	Y	D	R	V	V	E	E	F	A	P	L	I	D	I	D	P	W	L	L	N	P	Y	F	D	T	C
Template Known Secondary structure		.		T	T				S						S			.	.	.	.	T	T				G	G	G	S	S		S	S				S				T	T	G	G	G	S		T	T																		T			G	G	G	G
Template Predicted Secondary structure		.																.	.	.	.
Template SS confidence
			165	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		292																																	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320												.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	Q	M	E	K	Y	V	V	K	P	I	F	S	R	E	G	A	N	V	S	I	I	E	N	G	K	T	.	.	.	.	.	.	.	.	.	.	.	I	E	A	A	E	G	P	Y
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	L	D	F	H	A	R	L	G	E	E	Q	L	A	E	K	V	D	S	L	L	A	K	I	R	R	K	Y	A	E	Y	G	V	K	Q	E	P	F	V	I	V	K	A	D	A	G	T	Y	G	X	G	I	X	T	V	K	S	A	D	D	V	R	D	L	N	R	K	Q	R	N	K	X	S	V	V	K	E	G	L
Template Known Secondary structure						T	T	S	S	T	T																							T			S											G	G	G								S	S	G	G	G	G	S	S												S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.						.	.	.	.	380	.	.	.	.
Predicted Secondary structure																						.	.	.																												.	.	.	.	.
Query SS confidence																						.	.	.																												.	.	.	.	.
Query Sequence		G	E	E	G	M	I	V	Q	Q	F	H	P	L	P	K	F	G	D	S	Y	.	.	.	M	L	I	G	S	W	L	V	N	D	Q	P	A	G	I	G	I	R	E	D	R	A	L	I	T	Q	D	.	.	.	.	.	M	S	R	F	Y	P	H	I	F
Query Conservation																						.	.	.																												.	.	.	.	.
Alig confidence																						.	.	.				.	.																							.	.	.	.	.
Template Conservation																												.	.
Template Sequence		K	V	S	E	V	I	L	Q	E	G	V	Y	T	F	E	H	L	K	D	A	V	A	E	P	V	I	.	.	Y	X	X	D	H	F	V	V	G	G	F	Y	R	V	H	T	S	R	G	A	D	E	N	L	N	A	P	G	X	H	F	E	P	L	T	F
Template Known Secondary structure																			T	T								.	.				T	T											S			S	T	T	T	T	T	S			T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions