 |
Job Description | P0ADT5 | Confidence | 88.77% | Date | Thu Jan 5 11:21:48 GMT 2012 |
Rank | 65 | Aligned Residues | 22 |
% Identity | 23% | Template | c3e5nA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; |
PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331
|
Resolution | 2.00 Å |
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | S | R | L | D | L | A | W | D | G | T | G | E | P | K | L | L | E | N | N | A | D |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |
|
|   |   |
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
Template Sequence |   |
M | A | R | V | D | V | F | L | C | A | D | G | R | I | V | I | N | E | V | N | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
298 | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|