Job Description P0ADT5 Confidence 100.00% Date Thu Jan 5 11:21:48 GMT 2012 Rank 2 Aligned Residues 316 % Identity 29% Template c2vpmB_ PDB info PDB header:ligase Chain: B: PDB Molecule:trypanothione synthetase; PDBTitle: trypanothione synthetase Resolution 2.8 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		Y	Y	K	L	T	L	A	Q	V	E	K	L	E	E	V	T	A	E	L	H	Q	M	C	L	K	V	V	E	K	V	I	A	S	D	E	L	M	T	K	F	R	I	P	K	H	T	W	S	F	V	R	Q	S	W	L	T	H	Q	P	S	L	Y	S	R	L	D	L	A	W	D	G	T	.	G	E	P	K	L	L	E
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		Y	Y	E	S	N	H	E	F	H	L	R	C	V	A	Y	G	T	Q	L	H	A	I	F	M	E	A	T	A	Q	V	I	E	S	D	E	K	L	R	L	F	A	I	P	E	E	F	W	P	R	I	R	H	S	W	K	Y	Q	Q	T	Y	I	S	G	R	F	D	F	A	F	N	N	E	T	G	E	V	K	C	F	E
Template Known Secondary structure																																	T								T	T			G	G	G															S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	A	D	T	P	T	S	L	Y	E	A	A	F	F	Q	W	I	W	L	E	D	Q	L	N	A	G	N	L	P	E	G	S	D	Q	F	N	S	L	Q	E	K	L	I	D	R	F	V	E	L	R	E	Q	Y	G	F	Q	L	L	H	L	T	C	C	R	D	T	V	E	D	R	G	T	I	Q	Y	L	Q	D	C
Query Conservation
Alig confidence																													.	.																					.	.	.	.
Template Conservation																													.	.																					.	.	.	.
Template Sequence		Y	N	A	D	S	A	S	T	L	L	E	C	G	L	I	Q	Q	K	W	A	E	S	V	G	L	D	K	.	.	Q	D	T	R	G	S	G	F	A	V	E	R	N	L	K	M	A	W	A	N	.	.	.	.	S	G	A	T	G	R	V	H	F	C	V	D	E	E	R	E	E	Q	Y	T	A	L	Y	C	M	Q	A
Template Known Secondary structure				T	T			T	T						T										T				.	.	T	T				G	G	G	G												.	.	.	.	S				S								S
Template Predicted Secondary structure																													.	.																					.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																							250	.	.
Predicted Secondary structure													.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	E	A	E	I	A	T	E	F	L	.	Y	I	D	D	I	G	L	G	E	K	G	Q	F	T	D	L	Q	D	Q	V	I	S	N	L	F	K	L	Y	P	W	E	F	M	L	R	E	M	F	S	T	K	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	G
Query Conservation													.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	A	V	G	L	E	G	K	L	C	I	L	F	D	E	F	R	F	D	D	N	G	H	V	V	D	S	D	G	V	R	V	R	N	V	W	K	T	W	M	W	E	S	A	I	T	D	Y	Y	A	A	R	E	E	R	G	E	N	W	K	P	S	P	K	D	K	V	R	L	C	D	L	L	L	G	D	D	W	E
Template Known Secondary structure				T	T	T								T	T	T	T					T	T	S					T	T			B							S	S																		T	T					T	T	S	B								S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	W	L	E	P	A	W	K	S	I	I	S	N	K	A	L	L	P	L	L	W	E	M	F	P	N	H	P	N	L	L	P	A	Y	F	A	E	D	D	H	P	Q	M	E	K	Y	V	V	K	P	I	F	S	R	E	G	A	N	V	S	I	I	E	N	G	K	T	I	E	A	A	E	G	P	Y	G	E	E	G
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	Y	F	E	P	M	W	K	V	I	P	S	N	K	A	I	L	P	M	I	Y	H	N	H	P	E	H	P	A	I	L	K	A	E	Y	E	L	T	D	E	L	R	K	H	G	Y	A	K	K	P	I	V	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S				S		G	G	G	G	T	T	T	S	G	G	G									T	T		T	T						S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	V	Q	Q	F	H	P	L	P	K	F	G	D	S	Y	M	L	I	G	S	W	L	V	N	D	Q	P	A	G	I	G	I	R	E	D	R	A	L	I	T	Q	D	M	S	R	F	Y	P	H	I	F
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	I	Y	Q	Q	L	F	E	L	K	K	Q	D	D	Y	Y	A	I	I	G	G	W	M	I	G	D	A	F	S	G	T	G	I	R	E	D	K	S	V	I	T	G	V	D	S	P	F	A	A	V	R	I
Template Known Secondary structure		.											B	T	T	B										T	T											S	S				G	G	G	S
Template Predicted Secondary structure		.
Template SS confidence
			581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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