Job Description P0ADT5 Confidence 98.52% Date Thu Jan 5 11:21:48 GMT 2012 Rank 11 Aligned Residues 200 % Identity 13% Template c2p0aA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:synapsin-3; PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp Resolution 1.90 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																													.	.	.									.																						.	.	.	.
Query SS confidence																																													.	.	.									.																						.	.	.	.
Query Sequence		F	Q	L	L	H	L	T	C	C	R	D	T	V	E	D	R	G	T	I	Q	Y	L	Q	D	C	A	T	E	A	E	I	A	T	E	F	L	Y	I	D	D	I	G	L	.	.	.	G	E	K	G	Q	F	T	D	.	L	Q	D	Q	V	I	S	N	L	F	K	L	Y	P	W	E	F	M	L	R	E	.	.	.	.
Query Conservation																																													.	.	.									.																						.	.	.	.
Alig confidence															.																														.	.	.									.																						.	.	.	.
Template Conservation															.
Template Sequence		R	P	R	I	L	L	V	I	D	D	A	H	T	.	D	W	S	K	Y	F	H	G	K	K	V	N	G	E	I	E	I	R	V	E	Q	A	E	F	S	E	L	N	L	A	A	Y	V	T	G	G	C	M	V	D	M	Q	R	S	F	K	P	D	F	I	L	V	R	Q	H	A	Y	S	M	A	L	G	E	D	Y	R
Template Known Secondary structure												S	S		.		G	G	G	G	G	T	T				T	T	T										G	G	G							T	T	S													S						S		S			G	G	G	T
Template Predicted Secondary structure															.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.										.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																					.															.	.	.	.	.	.	.	.	.
Query SS confidence																					.															.	.	.	.	.	.	.	.	.
Query Sequence		M	F	S	T	K	L	E	D	A	G	V	R	W	L	E	P	A	W	K	.	S	I	I	S	N	K	A	L	L	P	L	L	W	E	.	.	.	.	.	.	.	.	.	M	F	P	N	H	P	N	L	L	P	A	Y	F	A	E	D	D	H	P	Q	M	E	K	Y	V	V	K	P	I	F	S	R	E	G	A	N	V
Query Conservation																					.															.	.	.	.	.	.	.	.	.
Alig confidence																					.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	V	I	G	L	Q	Y	G	G	L	P	A	V	N	S	L	Y	S	V	Y	N	F	C	S	K	P	W	V	F	S	Q	L	I	K	I	F	H	S	L	G	P	E	K	F	P	L	V	E	Q	T	F	F	P	N	H	K	P	M	V	T	A	P	H	F	P	V	V	V	K	L	G	H	A	H	A	G	M	G	K
Template Known Secondary structure										T	T					S								T	T																		T	T	T	S		B							S	S	S	T	T					S	S	S	S						S	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		S	I	I	E	N	G	K	T	I	E	A	A	E	G	P	Y	G	.	.	E	E	G	M	I	V	Q	Q	F	H	P	L	P	K	F	G	D	S	Y	M	L	I	G	S	W	L	V	N	D	Q	P	A	G	I	G	I	R	E	D	R	A	L	I	T	Q	D	M	S
Query Conservation																			.	.
Alig confidence																			.	.															.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		I	K	V	E	N	Q	L	D	F	Q	D	I	T	S	V	V	A	M	A	K	T	Y	A	T	T	E	A	F	I	D	S	K	Y	.	.	.	.	.	.	D	I	R	I	Q	K	I	G	S	N	Y	K	A	Y	M	R	T	S	I	S	G	N	W	K	A	N	T	G
Template Known Secondary structure						S															T														.	.	.	.	.	.								T	T										S	S	S		S	S	T	T	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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