Job Description P0ADT5 Confidence 100.00% Date Thu Jan 5 11:21:48 GMT 2012 Rank 1 Aligned Residues 342 % Identity 28% Template c2ioaA_ PDB info PDB header:ligase, hydrolase Chain: A: PDB Molecule:bifunctional glutathionylspermidine PDBTitle: e. coli bifunctional glutathionylspermidine2 synthetase/amidase incomplex with mg2+ and adp and3 phosphinate inhibitor Resolution 2.80 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		C	E	D	A	Y	Y	K	L	T	L	A	Q	V	E	K	L	E	E	V	T	A	E	L	H	Q	M	C	L	K	V	V	E	K	V	I	A	S	D	E	L	M	T	K	F	R	I	P	K	H	T	W	S	F	V	R	Q	S	W	L	T	H	Q	P	.	S	L	Y	S	R	L	D	L	A	W	D	G	T	G	E	P
Query Conservation																																																																	.
Alig confidence																																																																	.															.
Template Conservation																																																																																.
Template Sequence		D	P	Y	H	Y	Y	T	I	T	E	S	A	E	Q	E	L	I	K	A	T	N	E	L	H	L	M	Y	L	H	A	T	D	K	V	L	K	D	D	N	L	L	A	L	F	D	I	P	K	I	L	W	P	R	L	R	L	S	W	Q	R	R	R	H	H	M	I	T	G	R	M	D	F	C	M	D	E	R	G	.	L
Template Known Secondary structure			T	T																																	T						G	G	G				G	G	G												T	T													T	T		.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	E	N	N	A	D	T	P	T	S	L	Y	E	A	A	F	F	Q	W	I	W	L	E	D	Q	L	N	A	G	N	L	P	E	G	S	D	Q	F	N	S	L	Q	E	K	L	I	D	R	F	V	E	L	R	E	Q	Y	G	F	Q	L	L	H	L	T	C	C	R	D	T	V	E	D	R	G	T	I	Q	Y
Query Conservation
Alig confidence																														.	.	.	.																							.	.	.	.
Template Conservation																														.	.	.	.																							.	.	.	.
Template Sequence		K	V	Y	E	Y	N	A	D	S	A	S	C	H	T	E	A	G	L	I	L	E	R	W	A	E	Q	G	Y	.	.	.	.	K	G	N	G	F	N	P	A	E	G	L	I	N	E	L	A	G	A	W	K	H	S	.	.	.	.	R	A	R	P	F	V	H	I	M	Q	D	K	D	I	E	E	N	Y	H	A	Q	F
Template Known Secondary structure									S	S									T											.	.	.	.		S	S		B		T	T	T	T											T	S	.	.	.	.				S								S
Template Predicted Secondary structure																														.	.	.	.																							.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.																				.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	D	C	A	T	E	A	E	I	A	T	E	F	L	Y	I	D	D	I	G	L	G	E	K	G	Q	F	T	D	L	Q	D	Q	V	I	S	N	L	F	K	L	Y	P	W	E	F	M	L	R	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	T	K	L	E	D	A	G
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.
Template Sequence		M	E	Q	A	L	H	Q	A	G	F	E	T	R	I	L	R	G	L	D	.	.	.	E	L	G	W	Q	L	I	D	G	E	G	R	L	V	N	C	V	W	K	T	W	A	W	E	T	A	F	D	Q	I	R	E	V	F	A	A	V	P	I	R	T	G	H	P	Q	N	E	V	R	L	I	D	V	L	L	R	P	E
Template Known Secondary structure									T	T								S	S	T	.	.	.	T		B				B		T	T	S		B								S															S					S			T	T					S					T	S	T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.				.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	R	W	L	E	P	A	W	K	S	I	I	S	N	K	A	L	L	P	L	L	W	E	M	F	P	N	H	P	N	L	L	P	A	Y	F	A	E	D	D	H	P	Q	M	E	K	Y	V	V	K	P	I	F	S	R	E	G	A	N	V	S	I	I	E	N	G	K	.	T	I	E	A	A	E	G	P	Y	G	E	E
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		V	L	V	F	E	P	L	W	T	V	I	P	G	N	K	A	I	L	P	I	L	W	S	L	F	P	H	H	R	Y	L	L	D	T	D	F	T	V	N	D	E	L	V	K	T	G	Y	A	V	K	P	I	A	G	R	C	G	S	N	I	D	L	V	S	H	H	E	E	V	L	D	K	T	S	G	K	F	A	E	Q
Template Known Secondary structure						S		G	G	G	G	T	T	T	S	G	G	G								S	T	T		T	T						S	S															T	T			T	T		S						T	T	S									T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	I	V	Q	Q	F	H	P	L	P	K	F	G	D	S	Y	M	L	I	G	S	W	L	V	N	D	Q	P	A	G	I	G	I	R	E	D	R	A	L	I	T	Q	D	M	S	R	F	Y	P	H	I	F	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	I	Y	Q	Q	L	W	C	L	P	K	V	D	G	K	Y	I	Q	V	C	T	F	T	V	G	G	N	Y	G	G	T	C	L	R	G	D	E	S	L	V	I	K	K	E	S	D	I	E	P	L	I	V	V	K
Template Known Secondary structure															T	T											T	T											S	S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions