Job Description P0ADT5 Confidence 98.24% Date Thu Jan 5 11:21:48 GMT 2012 Rank 13 Aligned Residues 138 % Identity 13% Template c1pk8D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:rat synapsin i; PDBTitle: crystal structure of rat synapsin i c domain complexed to2 ca.atp Resolution 2.10 Å

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		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.										.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																					.															.	.	.	.	.	.	.	.	.
Query SS confidence																					.															.	.	.	.	.	.	.	.	.
Query Sequence		M	F	S	T	K	L	E	D	A	G	V	R	W	L	E	P	A	W	K	.	S	I	I	S	N	K	A	L	L	P	L	L	W	E	.	.	.	.	.	.	.	.	.	M	F	P	N	H	P	N	L	L	P	A	Y	F	A	E	D	D	H	P	Q	M	E	K	Y	V	V	K	P	I	F	S	R	E	G	A	N	V
Query Conservation																					.															.	.	.	.	.	.	.	.	.
Alig confidence																					.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	V	I	G	L	Q	Y	A	G	I	P	S	V	N	S	L	H	S	V	Y	N	F	C	D	K	P	W	V	F	A	Q	M	V	R	L	H	K	K	L	G	T	E	E	F	P	L	I	D	Q	T	F	Y	P	N	H	K	E	M	L	S	S	T	T	Y	P	V	V	V	K	M	G	H	A	H	S	G	M	G	K
Template Known Secondary structure										T	T					S								T	S	S																	T	T	T			B							S	S	G	G	G					S	S	S	S						S	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																.	.																																													.
Query SS confidence																.	.																																													.
Query Sequence		S	I	I	E	N	G	K	T	I	E	A	A	E	G	.	.	P	Y	G	E	E	G	M	I	V	Q	Q	F	H	P	L	P	K	F	G	D	S	Y	M	L	I	G	S	W	L	V	N	D	Q	P	A	G	I	G	I	R	E	D	R	A	.	L	I	T	Q	D	M	S	R	F	Y	P	H	I	F	V	E
Query Conservation																.	.																																													.
Alig confidence																.	.															.	.	.	.	.	.																									.
Template Conservation																																.	.	.	.	.	.
Template Sequence		V	K	V	D	N	Q	H	D	F	Q	D	I	A	S	V	V	A	L	T	K	T	Y	A	T	A	E	P	F	I	D	.	.	.	.	.	.	A	K	Y	D	V	R	V	Q	K	I	G	Q	N	Y	K	A	Y	M	R	T	S	V	S	G	N	W	K	T	N	T	G	S	A	M	L	E	Q	I	A	M	S
Template Known Secondary structure						S															T	S										.	.	.	.	.	.											T	T										S	S	S		S	S	T	T	S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.							310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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