Job Description P0ADT5 Confidence 95.16% Date Thu Jan 5 11:21:48 GMT 2012 Rank 43 Aligned Residues 114 % Identity 9% Template c1ehiB_ PDB info PDB header:ligase Chain: B: PDB Molecule:d-alanine:d-lactate ligase; PDBTitle: d-alanine:d-lactate ligase (lmddl2) of vancomycin-resistant2 leuconostoc mesenteroides Resolution 2.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.										.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		I	S	N	L	F	K	L	Y	P	W	E	F	M	L	R	E	M	F	S	T	K	L	E	D	A	G	V	R	W	L	.	.	E	P	A	W	K	S	I	I	S	N	K	A	L	L	P	L	L	W	E	.	.	.	.	.	.	.	.	.	M	F	P	N	H	P	N	L	L	P	A	Y	F	A	E	D	D	H	P	Q
Query Conservation																																.	.																				.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	I	F	F	P	V	V	H	G	N	L	G	E	D	G	T	L	Q	G	L	F	K	L	L	D	K	P	Y	V	G	A	P	L	R	G	H	A	V	S	F	D	K	A	L	T	K	E	L	L	T	V	N	G	I	R	N	T	K	Y	I	V	V	D	P	E	S	A	N	N	W	S	W	D	K	I	V	A	E	L
Template Known Secondary structure			S							T	T	T	T	T	S	S	S									T	T			B	S	S											S											T	T											T	T	G	G	G	G										T
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		M	E	K	Y	V	V	K	P	I	F	S	R	E	G	A	N	V	S	I	I	E	N	G	K	T	I	E	A	A	E	G	P	Y	G	E	.	.	E	G	M	I	V	Q	Q	F	H	P
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		G	N	I	V	F	V	K	A	A	N	Q	G	S	S	V	G	I	S	R	V	T	N	A	E	E	Y	T	E	A	L	S	D	S	F	Q	Y	D	Y	K	V	L	I	E	E	A	V	N
Template Known Secondary structure			S							S	S			S	S	T	T						S												T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions