Job Description Q9S4X2 Confidence 97.57% Date Thu Jan 5 12:38:25 GMT 2012 Rank 59 Aligned Residues 142 % Identity 13% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		D	A	L	M	V	S	F	Y	G	W	N	R	V	D	R	F	M	A	A	W	.	K	N	A	G	F	S	V	V	G	H	L	V	F	T	K	T	Y	T	S	K	A	A	Y	V	G	Y	R	H	E	C	A	Y	I	L	A	K	G	R	P	A	L	P	Q	K	P	L	P	D	V	L	G	W	K	Y	S	G	N	R	H
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		G	N	F	L	V	L	Q	L	L	S	A	G	A	E	Y	Q	R	A	A	L	I	S	A	L	Q	T	L	Y	P	E	C	S	I	Y	D	R	S	D	V	A	V	R	K	K	E	G	X	E	L	T	Q	G	P	V	T	G	E	L	P	P	A	L	L	P	I	E	E	H	G	X	K	L	L	V	D	I	Q	H	G	H
Template Known Secondary structure		T	T								S						T													T	T										T					T	T										S					S	S						T	T							T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		H	P	T	E	K	P	V	T	S	L	Q	P	L	I	E	S	F	T	H	P	N	A	I	V	L	D	P	F	A	G	S	G	S	T	C	V	A	A	L	Q	S	.	G	R	R	Y	I	G	I	E	L	L	E	Q	Y	H	R	A	G	Q	Q	R	L	A
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		K	T	G	Y	Y	L	D	Q	R	D	S	R	L	A	T	R	R	Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E
Template Known Secondary structure		T	T	S	S		G	G	G												T	T							T		T	T	T									T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions