 |
Job Description | Q9S4X2 | Confidence | 92.66% | Date | Thu Jan 5 12:38:25 GMT 2012 |
Rank | 245 | Aligned Residues | 54 |
% Identity | 11% | Template | c3b89A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:16s rrna methylase; |
PDBTitle: crystal structure of rrna methylase from escherichia coli
|
Resolution | 2.60 Å |
|
 |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | S | L | Q | P | L | I | E | S | F | T | H | P | N | A | I | V | L | D | P | F | A | G | S | G | S | T | C | V | A | A | L | Q | S | G | R | R | Y | I | G | I | E | L | L | E | Q | Y | H | R | A | G | Q | Q | R | L | A |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   | . |   |   |   |
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
D | T | L | Y | D | F | I | F | S | A | . |
. |
E | T | P | R | R | V | L | D | I | A | C | G | L | N | P | L | A | L | Y | E | R | G | . |
I | A | S | V | W | G | C | D | I | H | Q | G | L | G | D | V | I | T | P | F | A | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | S | . | . |
|
|
| S |  |  |  |  |  | T |
| T | T | T |  |  |  |  |  | T | T | T | . |
| S |  |  |  |  |  |  | S | B |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|