Job Description Q9S4X2 Confidence 25.72% Date Thu Jan 5 12:38:25 GMT 2012 Rank 328 Aligned Residues 125 % Identity 16% Template c2px2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:genome polyprotein [contains: capsid protein c PDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1) Resolution 2.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		F	P	G	N	A	V	D	F	I	L	T	D	P	P	Y	L	V	G	F	R	D	R	Q	G	R	T	I	A	G	D	K	T	D	E	W	L	Q	P	A	C	N	E	M	Y	R	V	L	K	K	D	.	A	L	M	V	S	F	Y	G	W	N	R	V	D	R	F	M	A	A	W	K	N	A	G	F	S	V	V	G	H
Query Conservation																																																				.
Alig confidence															.	.	.	.	.	.	.	.	.																													.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		K	P	S	E	I	S	D	T	L	L	C	D	I	.	.	.	.	.	.	.	.	.	G	E	S	S	P	S	A	E	I	E	E	Q	R	T	L	R	I	L	E	M	V	S	D	W	L	S	R	G	P	K	E	F	C	I	K	I	L	C	P	Y	M	P	K	V	I	E	K	L	E	S	L	Q	R	R	F	G	G	G
Template Known Secondary structure		S						S							.	.	.	.	.	.	.	.	.					S																					T	T			S							S		T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.			.	170
Predicted Secondary structure																																																																							.	.						.	.
Query SS confidence																																																																							.	.						.	.
Query Sequence		L	V	F	T	K	T	Y	T	S	K	A	A	Y	V	G	Y	R	H	E	C	A	Y	I	L	A	K	G	R	P	A	L	P	Q	K	P	L	P	D	V	L	G	W	K	Y	S	G	N	R	H	H	P	T	E	K	P	V	T	S	L	Q	P	L	I	E	S	F	T	H	P	.	.	N	A	I	V	L	.	.	D	P
Query Conservation																																																																							.	.						.	.
Alig confidence				.	.						.	.	.	.											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.						.	.
Template Conservation				.	.						.	.	.	.											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	.	.	R	V	P	L	S	.	.	.	.	R	N	S	N	H	E	M	Y	W	V	.	.	S	G	A	S	G	N	I	V	H	A	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	S	Q	V	L	I	G	R	M	D	K	K	I	W	K	G	P	K	Y	E	E	D	V
Template Known Secondary structure				.	.			T	T	S	.	.	.	.		T	T								.	.	T	T			S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	S	S		S	S
Template Predicted Secondary structure				.	.						.	.	.	.											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.			.	.	210	.	.					.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.																				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		171	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	G	S	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	G	S	G	T
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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