Job Description P42915 Confidence 99.92% Date Thu Jan 5 12:02:14 GMT 2012 Rank 5 Aligned Residues 120 % Identity 33% Template d3bwud1 SCOP info FimD N-terminal domain-like FimD N-terminal domain-like Usher N-domain Resolution 1.76

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		Y	Y	F	D	P	I	M	L	E	T	T	K	S	G	M	Q	T	T	D	L	S	R	F	S	K	K	Y	A	Q	L	P	G	T	Y	Q	V	D	I	W	L	N	K	K	K	V	S	Q	K	K	I	T	F	T	A	.	N	A	E	Q	L	L	Q	P	Q	F	T	V	E	Q	L	R	E	L	G	I	K	V	D	E	I
Query Conservation																																																								.
Alig confidence													.	.																																										.
Template Conservation													.	.
Template Sequence		L	Y	F	N	P	R	F	L	A	D	D	.	.	P	Q	A	V	A	D	L	S	R	F	E	N	G	Q	E	L	P	P	G	T	Y	R	V	D	I	Y	L	N	N	G	Y	M	A	T	R	D	V	T	F	N	T	G	D	S	E	Q	G	I	V	P	C	L	T	R	A	Q	L	A	S	M	G	L	N	T	A	S	V
Template Known Secondary structure						G	G	G	G	T	T		.	.	T	T										T	T		S	S		S										T	T														S	S	T	T	S													T	T	B		G	G	G	S
Template Predicted Secondary structure													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	A	E	K	D	D	D	S	V	I	N	S	L	E	Q	I	I	P	G	T	A	A	E	F	D	F	N	H	Q	Q	L	N	L	S	I	P	Q	I	A	L	Y	R
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		A	G	M	N	L	L	A	D	D	A	.	C	V	P	L	T	T	M	V	Q	D	A	T	A	H	L	D	V	G	Q	Q	R	L	N	L	T	I	P	Q	A	F	M	S	N
Template Known Secondary structure		T	T	G	G	G	S		T	T		.								S	T	T							T	T	T	T								G	G	G	B
Template Predicted Secondary structure												.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions