Job Description P42915 Confidence 51.72% Date Thu Jan 5 12:02:14 GMT 2012 Rank 36 Aligned Residues 151 % Identity 11% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410			.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		P	E	F	A	E	A	T	A	I	Y	G	L	N	N	T	F	T	L	Y	G	G	L	L	G	S	.	.	E	D	Y	Y	A	L	G	I	G	I	G	G	T	L	G	A	L	G	A	L	S	M	D	I	N	R	A	D	T	Q	F	D	N	Q	H	S	F	H	G	Y	Q	W	R	T	Q	Y	I	K	D	I	P	E	T
Query Conservation																											.	.
Alig confidence																											.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	.
Template Known Secondary structure															T	T												G	G	G									T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.																			S	S	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.														.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	N	I	A	V	S	Y	Y	R	Y	T	N	D	G	Y	F	S	F	N	E	A	N	T	R	N	W	D	Y	N	S	R	Q	K	S	E	I	Q	F	N	I	S	Q	T	I	F	D	G	V	S	L	Y	A	S	G	S	Q	Q	D	Y	W	G	N	N	D	K	N	R	N	I	S	V	G	V	S	G	Q	Q	W	G
Query Conservation
Alig confidence									.											.	.	.	.
Template Conservation									.											.	.	.	.
Template Sequence		N	W	T	F	R	T	G	.	I	A	F	D	D	S	P	V	P	A	.	.	.	.	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S	V	D	V	G	V	S	Y	M	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	S	E	G	K	A	W	L
Template Known Secondary structure		S							.							S	S		T	.	.	.	.	T	T			S	S	S																S	S	S	S																				T	T
Template Predicted Secondary structure									.											.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		544	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Y	S	L	N	Y	Q	Y	S	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	T	N	F	N	Y	A	F	H	H	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions