Job Description P64604 Confidence 2.71% Date Thu Jan 5 12:09:51 GMT 2012 Rank 43 Aligned Residues 79 % Identity 15% Template c2pjhB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: strctural model of the p97 n domain- npl4 ubd complex Resolution UNK

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																													.
Query SS confidence																													.	.	.																													.
Query Sequence		G	L	K	A	R	S	P	V	S	I	G	G	V	V	V	G	R	V	A	D	I	T	L	D	P	K	T	.	.	.	Y	L	P	R	V	T	L	E	I	E	Q	R	Y	N	H	I	P	D	T	S	S	L	S	I	R	T	S	G	.	L	L	G	E	Q	Y	L	A	L	N	V	G	F	E	D	P	E	L	G	T	A
Query Conservation																													.	.	.																													.
Alig confidence																													.	.	.														.															.
Template Conservation																																													.
Template Sequence		Q	L	F	R	G	D	T	V	L	L	K	G	K	K	R	R	E	A	V	C	I	V	L	S	D	D	T	C	S	D	E	K	I	R	M	N	R	V	V	R	N	N	L	.	R	V	R	L	G	D	V	I	S	I	Q	P	C	P	D	V	K	Y	G	K	R	I	H	V	L	P	I	D	D	T	V	E	G	I	T	G
Template Known Secondary structure		T			S	S								S	T	T											T	T	S		S	S												T	.	T			T	T									S	S			B		S							B	G	G	G	S	T	T			S
Template Predicted Secondary structure																																													.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		127	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	F	E
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions