 |
Job Description | P64604 | Confidence | 2.41% | Date | Thu Jan 5 12:09:51 GMT 2012 |
Rank | 64 | Aligned Residues | 38 |
% Identity | 21% | Template | c2h0pA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:envelope glycoprotein; |
PDBTitle: nmr structure of the dengue-4 virus envelope protein domain2 iii
|
Resolution | UNK |
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | S | S | L | S | I | R | T | S | G | L | L | G | E | Q | Y | L | A | L | N | V | G | F | E | D | P | E | L | G | T | A | I | L | K | D | G | D | T | I |
Query Conservation |   |
  |
|
|   |
|   |
|   |   |   |   |
|
|
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|   |
| . | . |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
Template Sequence |   |
T | N | S | V | T | N | I | E | L | E | P | P | F | G | D | S | Y | I | V | I | . |
. |
G | V | G | N | S | A | L | T | L | H | W | F | R | K | G | S | S | I |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  | . | . | S | S | G | G | G |
|  |  |  |  |  |  | S | S | S | T | T | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|