Return to main results Retrieve Phyre Job Id

Job DescriptionP19934
Confidence35.44%DateThu Jan 5 11:37:42 GMT 2012
Rank16Aligned Residues64
% Identity11%Templated2e7ga1
SCOP infoAlpha-lytic protease prodomain-like Ribosome-binding factor A, RbfA Ribosome-binding factor A, RbfA
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   337..340.........350.. .......360 .........370......... 380.........390..... ....400
Predicted Secondary structure 
...







.




.



.



Query SS confidence 















. . .







.


















.















.




Query Sequence  INNYAGQIKSAIESKF. . . YDASSYAG. KTCTLRIKLAPDGMLLDIK. PEGGDPALCQAALAAA. KLAKI
Query Conservation     
   
   
    ...       
.            
      .  

      
   
 .     
Alig confidence 















...







.


















.















.




Template Conservation    
   

   
  

             



 
 

 

  
 

 
              
  
   
Template Sequence  LRALNGLLYKALTDLLCTPEVSQELYDLNVELSKVSLTPDFSACRAYWKTTLSAEQNAHMEAVLQRSAAH
Template Known Secondary structure  TT
TTT
T


TTS




S
T
Template Predicted Secondary structure 


















Template SS confidence 





































































   93......100.........110.........120.........130.........140.........150.........160..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions