 |
Job Description | P19934 | Confidence | 8.75% | Date | Thu Jan 5 11:37:42 GMT 2012 |
Rank | 64 | Aligned Residues | 54 |
% Identity | 15% | Template | d1v9pa3 |
SCOP info | ATP-grasp
| DNA ligase/mRNA capping enzyme, catalytic domain
| Adenylation domain of NAD+-dependent DNA ligase
|
Resolution | 2.90 |
|
 |
  |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | |
|
|
|
. | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | |
. | . | 380 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
T | K | N | N | G | A | S | G | A | D | I | N | N | Y | A | G | Q | I | K | S | A | I | E | S | K | . |
. |
. |
. |
F | Y | D | A | S | S | Y | A | G | K | T | C | T | L | R | I | K | L | A | P | D | G | M | L | L | D | . |
I | K | P | E | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |
|   |
|   | . | . | . |   |
|   |
|
|   |
|   |
|
|
|
|
|
Template Sequence |   |
S | L | D | N | A | F | T | Y | E | E | V | L | A | F | E | E | R | L | E | R | A | L | G | R | K | R | P | F | L | Y | T | V | E | H | K | V | D | G | L | S | V | N | L | Y | Y | E | . |
. |
. |
E | G | V | L | V | F | G | A | T | R | G | D | G |
Template Known Secondary structure |   |
|
|
|  |  |
| S | S | S | T | T | T |  |  |  |  |  |  |  | T | T |
| S | S |
| S |
|
|  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  | . | . | . | T | T |  |  |  |  |  |  |  |
| T | T | S |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|