 |
Job Description | P19934 | Confidence | 18.77% | Date | Thu Jan 5 11:37:42 GMT 2012 |
Rank | 31 | Aligned Residues | 28 |
% Identity | 11% | Template | c3mlpE_ |
PDB info |
PDB header:transcription/dna | Chain: E: PDB Molecule:transcription factor coe1; |
PDBTitle: early b-cell factor 1 (ebf1) bound to dna
|
Resolution | 2.80 Å |
|
  |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | F | Y | D | A | S | S | Y | A | G | K | T | C | T | L | R | I | K | L | A | P | D | G | M | L | L | D | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
N | A | G | N | P | R | D | M | R | R | F | Q | V | V | V | S | T | T | V | N | V | D | G | H | V | L | A | V |
Template Known Secondary structure |   |
S | S | S |
|
| S | S |
|
|
|  |  |  |  |  |  | S | S | S |
|
| S | S |
|
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|