 |
| Job Description | P19934 | | Confidence | 19.99% | Date | Thu Jan 5 11:37:42 GMT 2012 |
| Rank | 28 | Aligned Residues | 25 |
| % Identity | 20% | Template | c2dnrA_ |
| PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:synaptojanin-1; |
PDBTitle: solution structure of rna binding domain in synaptojanin 1
|
| Resolution | UNK |
|
| | |
371 | . | . | . | . | |
. | . | . | . | |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|  |  | . | | | | | . | |
|
|
|
|  | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
P | D | G | M | L | . |
L | D | I | K | . |
P | E | G | G | D | P | A | L | C | Q | A | A | L | A | A | A |
| Query Conservation | |
| |
| | | . | | | | | . | | |
|
| | | | | | |
| | | |
| |
| Alig confidence | |
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
| | |
| | |
| | | |
|
|
| | | | | |
|
| Template Sequence | |
S | G | G | T | V | L | V | S | I | K | S | S | L | P | E | N | N | F | F | D | D | A | L | I | D | E | L |
| Template Known Secondary structure | |
S | S |
| | | | | | | |
| S | S | T | T | T |
| S |
|
| | | | | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | |
|
|
|
|
|
|
|
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
891 | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
