 |
Job Description | P19934 | Confidence | 10.73% | Date | Thu Jan 5 11:37:42 GMT 2012 |
Rank | 50 | Aligned Residues | 32 |
% Identity | 22% | Template | c1x65A_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:unr protein; |
PDBTitle: solution structure of the third cold-shock domain of the human2 kiaa0885 protein (unr protein)
|
Resolution | UNK |
|
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | Y | D | A | S | S | Y | A | G | K | T | C | T | L | R | I | K | L | A | P | D | G | M | L | L | D | I | K | P | E | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |   |   |
|   |   |   |
|
Template Sequence |   |
V | V | P | D | M | L | S | A | Q | R | N | H | A | I | R | I | K | K | L | P | K | G | T | V | S | F | H | S | H | S | G | P |
Template Known Secondary structure |   |
| B |
|
| S | S | S |
|
|
|
| B |
|
| S |
|  |  |
|
| B | T | T | B |
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|