Job Description P0AFX4 Confidence 25.10% Date Thu Jan 5 11:27:29 GMT 2012 Rank 9 Aligned Residues 87 % Identity 14% Template c3hosA_ PDB info PDB header:transferase, dna binding protein/dna Chain: A: PDB Molecule:transposable element mariner, complete cds; PDBTitle: crystal structure of the mariner mos1 paired end complex with mg Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																											.																											.	.	.
Query SS confidence																																											.																											.	.	.
Query Sequence		S	N	K	L	V	D	R	W	L	H	V	R	K	H	L	L	V	A	Y	Y	N	L	V	G	I	K	P	G	K	E	S	Y	M	R	L	N	E	K	A	L	D	.	D	F	C	Q	S	L	V	D	Y	L	S	A	G	H	F	S	I	Y	E	R	I	L	H	K	L	E	.	.	.	G	N	G	Q	L	A	R	A	A
Query Conservation																																											.																											.	.	.
Alig confidence															.	.	.	.	.	.																.	.	.	.	.			.																											.	.	.
Template Conservation															.	.	.	.	.	.																.	.	.	.	.
Template Sequence		T	A	R	A	V	R	D	T	L	E	T	L	N	.	.	.	.	.	.	W	E	V	L	P	H	A	A	Y	S	P	D	L	A	P	.	.	.	.	.	S	D	Y	H	L	F	A	S	M	G	H	A	L	A	E	Q	R	F	D	S	Y	E	S	V	K	K	W	L	D	E	W	F	A	A	K	D	D	E	F	Y	W
Template Known Secondary structure		S										T	T		.	.	.	.	.	.								T	T		T	T	S			.	.	.	.	.				T									T	T	T		B		S	S															S
Template Predicted Secondary structure															.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	W	P	Q	L	E	A	N	T	Q	Q	I	M	D	Y	Y	D	S	S	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	I	H	K	L	P	E	R	W	E	K	C	V	A	S	D	G	K	Y	F	E
Template Known Secondary structure																	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions