Job Description P0AFX4 Confidence 30.54% Date Thu Jan 5 11:27:29 GMT 2012 Rank 4 Aligned Residues 86 % Identity 19% Template c2plyB_ PDB info PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. Resolution 2.60 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.												.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.
Predicted Secondary structure																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		H	V	R	K	H	L	L	V	A	Y	Y	N	L	V	G	I	K	P	G	K	E	S	Y	M	R	.	.	.	.	L	N	E	K	A	L	D	D	F	C	Q	S	L	V	D	.	.	.	.	.	.	.	.	.	.	.	Y	L	S	A	G	H	F	S	I	Y	E	R	I	L	H	K	L	E	G	N	G	.	.	Q	L
Query Conservation																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		K	K	L	L	K	D	L	E	D	K	Y	R	V	S	R	W	Q	P	P	W	V	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	N	D	E	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N	L	A	S	T	G	P	F	G	L
Template Known Secondary structure																T	T	S											T	T																	T	S				S	S	S	S																				T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	A	K	I	W	P	Q	L	E	A	N	T	Q	Q	I	M	D	Y	Y	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	R	D	A	L	G	S	S	R	K	Y	V	L	P	L	L	E	Y	L	D	Q
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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