 |
Job Description | P0AFX4 | Confidence | 3.50% | Date | Thu Jan 5 11:27:29 GMT 2012 |
Rank | 83 | Aligned Residues | 26 |
% Identity | 23% | Template | c2dmtA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:homeobox protein barh-like 1; |
PDBTitle: solution structure of the homeobox domain of homeobox2 protein barh-like 1
|
Resolution | UNK |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Q | L | D | N | L | T | E | R | V | R | G | S | N | K | L | V | D | R | W | L | H | V | R | K | H |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|   |   |   |
|
|
|   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |
Template Sequence |   |
P | D | R | I | D | L | A | E | S | L | G | L | S | Q | L | Q | V | K | T | W | Y | Q | N | R | R | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|