Job Description P22523 Confidence 99.48% Date Wed Jan 25 15:20:42 GMT 2012 Rank 5 Aligned Residues 173 % Identity 11% Template c3qkuB_ PDB info PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp Resolution 3.30 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	R	S	L	T	L	I	N	W	N	G	F	F	A	R	T	F	D	L	D	E	L	V	T	T	L	S	G	G	N	G	A	G	K	S	T	T	M	A	A	F	V	T	A	L	I	P	D	L	T	L	L	H	F	R	N	T	T	E	A	G	A	T	S	G	S	R	D	K	G	L	H	G	K	L	K	A	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	E	R	V	T	V	K	N	F	R	S	H	S	D	T	V	V	E	F	K	E	G	I	N	L	I	I	G	Q	N	G	S	G	K	S	S	L	L	D	A	I	L	V	G	L	Y	W	P	L	R	I	K	D	I	K	K	D	E	F	T	K	V	G	A	R	D	T	Y	I	D	L	I	F	E	K	D	G	T	K
Template Known Secondary structure												T	T										S									T	T	S	S														S	S				T	T			T	T	T	T	B		T	T													S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		C	Y	S	M	L	D	T	I	N	S	R	H	Q	R	V	V	V	G	V	R	L	Q	Q	V	A	G	R	D	R	K	V	D	I	K	P	F	A	I	Q	G	L	P	M	S	V	Q	P	.	.	.	.	.	T	Q	L	V	T	E	T	L	N	E	R	Q	A	R	V	L	P	L	N	E	L	K	D	K	L	E	A	M
Query Conservation																																																	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	I	T	R	R	F	L	K	G	Y	S	S	G	E	I	H	A	M	K	R	L	V	G	N	E	W	K	H	V	T	E	P	S	S	K	A	I	S	A	F	M	E	K	L	I	P	Y	N	I	F	L	N	A	I	Y	I	R	Q	G	Q	I	D	A	I	L	E	S	D	E	A	R	E	K	V	V	R	E	V	L
Template Known Secondary structure										T	T		S	S											T	T						S		S	S												S								T	T				T	T		S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	Q	F	K	Q	F	N	S	I	T	D	Y	H	S	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	S	K	I	G	E	L	A	S	E	I	F	A	E	F	T
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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