Job Description P22523 Confidence 99.63% Date Wed Jan 25 15:20:42 GMT 2012 Rank 3 Aligned Residues 340 % Identity 14% Template c3qg5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rad50; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Resolution 3.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	F	R	S	L	T	L	I	N	W	N	G	F	F	A	R	T	F	D	L	D	E	L	V	T	T	L	S	G	G	N	G	A	G	K	S	T	T	M	A	A	F	V	T	A	L	I	P	D	L	T	L	L	H	F	R	N	T	T	E	A	G	A	T	S	G	S	R	D	K	G	L	H	G	K	L	K	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	R	P	E	R	L	T	V	R	N	F	L	G	L	K	N	V	D	I	E	F	Q	S	G	I	T	V	V	E	G	P	N	G	A	G	K	S	S	L	F	E	A	I	S	F	A	L	F	G	N	G	I	R	Y	P	N	S	Y	D	Y	V	N	R	N	A	V	D	G	T	A	R	L	V	F	Q	F	E	R	G	G
Template Known Secondary structure											S	B	T	T		S								S	S							S	T	T	S	S													T	S			S	S		S	S	G	G	G	G	B		S	S	S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	Y	S	M	L	D	T	I	N	S	R	H	Q	R	V	V	V	G	V	R	L	Q	Q	V	A	G	R	D	R	K	V	D	I	K	P	F	A	I	Q	G	L	P	M	S	V	Q	P	T	Q	L	V	T	E	T	L	N	E	R	Q	A	R	V	L	P	L	N	E	L	K	D	K	L	E	A	M	E	G	V	Q
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	Y	E	I	I	R	E	I	N	A	L	Q	R	K	H	N	A	K	L	S	E	I	L	E	N	G	K	K	A	A	I	A	A	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	V	K	Q	E	V	E	K	I	L	G	I	E
Template Known Secondary structure		S										T	T	T	T											T	T	S					S			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																															.	.	.	120	.	.	.	.	.	.	.	.	.	130
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	Q	F	N	S	I	T	D	Y	H	S	L	M	F	D	L	G	I	I	A	R	R	L	R	S	A	S	D	R	S	K	F	Y	R	L	I	E	A	S	L	Y	G	G	I	S	S	A	I	T	R	S	L	R	D	Y	L	L	P	E	N	S	G	V	R	K	A	F	Q	D	M	E	A	A	L	R	E	N	R	M
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	R	T	F	I	R	T	V	F	L	P	Q	G	E	I	D	K	L	L	I	S	P	P	S	E	I	T	E	I	I	S	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	S	K	E	T	L	E	K	L	E	K	L	L	K	E	K	X	K	K	L	E
Template Known Secondary structure							T	T	T												T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	A	I	R	V	T	Q	S	D	R	D	L	F	K	H	L	I	S	E	A	T	N	Y	V	A	A	D	Y	M	R	H	A	N	E	R	R	V	H	L	D	K	A	L	E	F	R	R	E	L	H	T	S	R	Q	Q	L	A	A	E	Q	Y	K	H	V	D	M	A	R	E	L	A	E	H	N	G	A	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	K	K	L	K	E	X	S	D	E	Y	N	N	L	D	L	L	R	K	Y	L	F	D	K	S	N	F	S	R	Y	F	T	G	R	V	L	E	A	V	L	K	R	T	K	A	Y	L	D	I	L	T	N	G	R	F	D	I	D	F	D	D	E	K	G	G	F	I	I	K	D	W	G	I	E	R	P	A	R	G
Template Known Secondary structure																										T	T	T																								T	T	T	T								S	S	S	S	S						T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	L	E	A	D	Y	Q	A	A	S	D	H	L	N	L	V	Q	T	A	L	R	.	Q	Q	E	K	I	E	R	Y	E	A	D	L	D	E	L	Q	I	R	L	E	E	Q	N	E	V	V	A	E	A	I	E	R	Q	Q	E	N	E	A	R	A	E	A	A	E	L	E	V	D	E	L	K	S	Q	L
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		L	S	G	G	E	R	A	L	I	S	I	S	L	A	X	S	L	A	E	V	A	S	G	R	L	D	A	F	F	I	D	E	G	F	S	S	L	D	T	E	N	K	E	K	I	A	S	V	L	K	E	L	E	R	L	N	K	V	I	V	F	I	T	H	D	R	E	F	S	E	A	F	D	R	K	L
Template Known Secondary structure		S																									S										G	G	G												G	G	G	G	G	G		S								S						T		S	S
Template Predicted Secondary structure
Template SS confidence
		767	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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