 |
Job Description | P22523 | Confidence | 96.54% | Date | Wed Jan 25 15:20:42 GMT 2012 |
Rank | 82 | Aligned Residues | 65 |
% Identity | 26% | Template | c2hydB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:abc transporter homolog; |
PDBTitle: multidrug abc transporter sav1866
|
Resolution | 3.00 Å |
|
 |
  |   |
1353 | . | . | . | . | . | . | 1360 | . | . | . | . | . | . | . | . | . | 1370 | . | . | . | . | . | . | . | . | . | 1380 | . | . | . | . | . | . | . | . | . | 1390 | . | . | . | . | . | . | . | . | . | 1400 | . | . | . | . | . | . | . | . | |
. | 1410 | . | . | . | . | . | . | . | . | . | 1420 | . | . | . | . | . | . | |
|
. | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
Query Sequence |   |
G | S | D | G | W | L | R | A | E | S | G | A | L | S | T | G | E | A | I | G | T | G | M | S | I | L | V | M | V | V | Q | S | W | E | D | E | S | R | R | L | R | G | K | D | I | S | P | C | R | L | L | F | L | D | E | A | . |
A | R | L | D | A | R | S | I | A | T | L | F | E | L | C | E | R | L | . |
. |
Q | M | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
| . |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
| . | . |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
G | Y | D | T | E | V | G | E | R | G | V | K | L | S | G | G | Q | K | Q | R | L | S | I | A | R | I | F | L | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | P | P | I | L | I | L | D | E | A | T | S | A | L | D | L | E | S | E | S | I | I | Q | E | A | L | D | V | L | S | K | D | R | T |
Template Known Secondary structure |   |
G | G | G |
| B |
|
| G | G | G | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S |  |  |  |  |  | S | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
466 | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . |
  |
  |   |
1430 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
L | I | I | A | A |
Query Conservation |   |
  |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
Template Sequence |   |
T | L | I | V | A |
Template Known Secondary structure |   |
 |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
529 | 530 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|