Job Description P22523 Confidence 98.51% Date Wed Jan 25 15:20:42 GMT 2012 Rank 12 Aligned Residues 169 % Identity 17% Template c1ii8B_ PDB info PDB header:replication Chain: B: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	T	H	A	M	L	L	D	V	L	S	E	Q	H	E	Q	H	Q	D	L	F	N	S	N	R	L	T	F	S	E	A	L	A	K	L	Y	Q	R	L	N	P	Q	I	D	M	G	Q	R	T	P	Q	T	I	G	E	E	L	L	D	Y	R	N	Y	L	E	M	E	V	E	V	N	R	G	S	D	G	W	L	R
Query Conservation
Alig confidence																																																									.	.
Template Conservation																																																									.	.
Template Sequence		R	E	R	V	K	K	E	I	K	D	L	E	K	A	K	D	F	T	E	E	L	I	E	K	V	K	K	Y	K	A	L	A	R	E	A	A	L	S	K	I	G	E	L	A	S	E	I	F	A	E	F	T	E	G	K	.	.	Y	S	E	V	V	V	R	A	E	E	N	K	V	R	L	F	V	V	W	E	G	K	E
Template Known Secondary structure																																																						T	T	S	.	.										T	T								B	T	T	B
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		709	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.			.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
		1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.		.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.				.	.	.	1430	.	.	.	.	.
Predicted Secondary structure																																																			.																			.	.	.
Query SS confidence																																																			.																			.	.	.
Query Sequence		A	E	S	G	A	L	S	T	G	E	A	I	G	T	G	M	S	I	L	V	M	V	V	Q	S	W	E	D	E	S	R	R	L	R	G	K	D	I	S	P	C	R	L	L	F	L	D	E	A	.	A	R	L	D	A	R	S	I	A	T	L	F	E	L	C	E	R	L	.	.	.	Q	M	Q	L	I	I	A	A	P
Query Conservation																																																			.																			.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.											.																			.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	L	T	F	L	S	G	G	E	R	I	A	L	G	L	A	F	R	L	A	M	S	L	Y	L	A	G	.	.	.	.	.	.	.	.	.	.	.	E	I	S	L	L	I	L	D	E	P	T	P	Y	L	D	E	E	R	R	R	K	L	I	T	I	M	E	R	Y	L	K	K	I	P	Q	V	I	L	V	S	H
Template Known Secondary structure				G	G	G	S																						S	.	.	.	.	.	.	.	.	.	.	.	S		S								S	S	S	S		S													T	G	G	G	S	S							S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.												.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
			1436	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	N	I	S	P	E	K	G	T	T	Y	K	L	V	R	K	V	F	Q	N	T	E	H	V	H	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		D	E	E	L	K	D	A	A	D	H	V	I	R	I	S	L	E	N	G	S	S	K	V	E	V	V	S
Template Known Secondary structure			G	G	G	G	G	T	S	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		856	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions