Job Description P22523 Confidence 99.43% Date Wed Jan 25 15:20:42 GMT 2012 Rank 7 Aligned Residues 189 % Identity 10% Template c1ii8A_ PDB info PDB header:replication Chain: A: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	R	S	L	T	L	I	N	W	N	G	F	F	A	R	T	F	D	L	D	E	L	V	T	T	L	S	G	G	N	G	A	G	K	S	T	T	M	A	A	F	V	T	A	L	I	P	D	L	T	L	L	H	F	R	N	T	T	E	A	G	A	T	S	G	S	R	D	K	G	L	H	G	K	L	K	A	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	E	R	V	T	V	K	N	F	R	S	H	S	D	T	V	V	E	F	K	E	G	I	N	L	I	I	G	Q	N	G	S	G	K	S	S	L	L	D	A	I	L	V	G	L	Y	W	P	L	R	I	K	D	I	K	K	D	E	F	T	K	V	G	A	R	D	T	Y	I	D	L	I	F	E	K	D	G	T	K
Template Known Secondary structure										S	S	S	S		S	S							S	S								T	T	S	S														T	T	S			T	T			T					T	S		S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		C	Y	S	M	L	D	T	I	N	S	R	H	Q	R	V	V	V	G	V	R	L	Q	Q	V	A	G	R	D	R	K	V	D	I	K	P	F	A	I	Q	G	L	P	M	S	V	Q	P	T	Q	L	V	T	E	T	L	N	E	.	.	.	.	R	Q	A	R	V	L	P	L	N	E	L	K	D	K	L	E	A	M	E
Query Conservation																																																											.	.	.	.
Alig confidence																																																											.	.	.	.
Template Conservation
Template Sequence		Y	R	I	T	R	R	F	L	K	G	Y	S	S	G	E	I	H	A	M	K	R	L	V	G	N	E	W	K	H	V	T	E	P	S	S	K	A	I	S	A	F	M	E	K	L	I	P	Y	N	I	F	L	N	A	I	Y	I	R	Q	G	Q	I	D	A	I	L	E	S	D	E	A	R	E	K	V	V	R	E	V	L
Template Known Secondary structure											T	T	S												T	T					S	S		S	S												S						T	T	T	T				T	T	T	T	G	G	G	S	S		S											T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	Q	F	K	Q	F	N	S	I	T	D	Y	H	S	L	M	F	D	L	G	I	I	A	R	R	L	R	S	A	S	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	D	K	F	E	T	A	Y	K	K	L	S	E	L	K	K	T	I	N	N	R	I	K	E	Y	R	D	I	L	A	R	T
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions