Return to main results Retrieve Phyre Job Id

Job DescriptionP22523
Confidence93.58%DateWed Jan 25 15:20:42 GMT 2012
Rank288Aligned Residues175
% Identity13%Templatec1bg1A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   939940.........950.........960.........970.........980.........990.........1000.........1010........
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  LKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYN
Query Conservation 
                                                 
      
      
   
           
Alig confidence 















































































Template Conservation 
 

  


  



   

 

  

 

   
 
      

 


    
    

     
      
     

 
Template Sequence  VTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDSVTRQKMQQLEQMLTALDQMRRSIVSELAGLL
Template Known Secondary structure 

TT




TT
Template Predicted Secondary structure 
Template SS confidence 















































































   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   10191020.........1030.........1040.........1050.........1060.........1070.........1080.........1090........
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  QVLASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAEMDNLTRKLRK
Query Conservation       
          
     

  
                  
   
         

  
         
      
Alig confidence 
































.













































Template Conservation     
 
   
   
  
    


      
  .    

   
 
      
      


   

  
 
 
      
Template Sequence  SAMEYVQKTLTDEELADWKRRQQIACIGGPPNI. CLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQHRPM
Template Known Secondary structure  TTT




.

S

TT
TTTTT
Template Predicted Secondary structure  .
Template SS confidence 















































































   226...230.........240.........250........ .260.........270.........280.........290.........300....
 
   10991100.........1110....
Predicted Secondary structure 
Query SS confidence 















Query Sequence  LERDYFEMREQVVTAK
Query Conservation 
      
 
      
Alig confidence 















Template Conservation 

    

   
   
Template Sequence  LEERIVELFRNLMKSA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















   305....310.........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions