Return to main results Retrieve Phyre Job Id

Job DescriptionP0C079
Confidence84.14%DateThu Jan 5 11:29:49 GMT 2012
Rank5Aligned Residues41
% Identity20%Templatec2bj3D_
PDB info PDB header:transcriptionChain: D: PDB Molecule:nickel responsive regulator; PDBTitle: nikr-apo
Resolution2.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30.........40.
Predicted Secondary structure 





.
Query SS confidence 
























.















Query Sequence  MGSINLRIDDELKARSYAALEKMGV. TPSEALRLMLEYIADN
Query Conservation 

 
  


  

  
  

   

.  
 

  
   

  
Alig confidence 
























.















Template Conservation 
 






  

  

      

 



 





  
 
Template Sequence  LIRFSISIPSKLLEKFDQIIEEIGYENRSEAIRDLIRDFIIR
Template Known Secondary structure 








T
SS
Template Predicted Secondary structure 






Template SS confidence 









































   3......10.........20.........30.........40....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions