Job Description Q47702 Confidence 55.46% Date Thu Jan 5 12:37:06 GMT 2012 Rank 4 Aligned Residues 75 % Identity 16% Template d1pvja_ SCOP info Cysteine proteinases Cysteine proteinases Papain-like Resolution 3.00

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	H	E	E	A	R	I	N	A	M	L	E	G	L	A	Q	K	K	D	L	I	F	V	R	N	G	D	E	H	T	C	Y	E	A	V	S	H	L	R	L	K	L	G	N	T	R	N	R	I	D	T	A	E	Q	F	I	D	K	V	A	S	S	S	S	I	T	G	K	P	Y	I	V	K	I	P	G	K	S	D
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	V	Q	K	M	A	I	S	E	L	M	A	D	V	G	I	S	V	D	M	D	Y	G	P	S	S	G	S	A	G	S	S	R	V	Q	R	A	L	K	E	N	F	G	Y	N	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	Q	I	N	R	G	D
Template Known Secondary structure																				T	T		B		S	S	S		B														T	T				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																									.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	Q	P	F	L	H	A	L	I	A	Q	T	D	K	T	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	K	Q	D	W	E	A	Q	I	D	K	E	L	S	Q	N	Q	P
Template Known Secondary structure		S															T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions