|   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | E | A | R | W | S | D | V | V | I | H | N | N | T | L | Y | Y | T | G | V | P | E | N | L | D | . |
. |
. |
. |
. |
. |
A | D | A | F | E | Q | T | A | N | T | L | A | Q | I | D | A | V | L | E | K | Q | G | S | N | K | S | S | I | L | D | A | T | I | F | L | A | D | K | N | D | F | A | A | M | N | K | A | W |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|   |
|
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
A | A | I | G | P | Y | A | Q | A | V | K | A | G | G | F | V | F | V | S | G | Q | I | P | L | A | P | D | G | S | L | V | E | G | D | I | R | V | Q | T | E | R | V | X | E | N | L | K | A | V | L | E | A | A | G | S | G | L | S | R | V | V | Q | T | T | C | F | L | A | D | X | E | D | F | P | G | F | N | E | V | Y |
Template Known Secondary structure |   |
|
|
| S | S |
|
| S |  |  |  |  | T | T |  |  |  |  |  |  |  |
| S | B |
| T | T | S |
| B |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |  |  | S |
| G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | W | V | V | A | G | H | A | P | V | R | C | T | V | Q | A | G | L | M | N | P | K | Y | K | V | E | I | K | I | V | A | A | V |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   | . |   |   |
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |
Template Sequence |   |
A | R | Y | F | T | P | . |
P | Y | P | A | R | A | T | V | A | V | K | A | L | P | R | G | V | R | V | E | V | A | C | V | A | L | A |
Template Known Secondary structure |   |
 |  |  |
|
| S | . | S |
|
|  |  |  |  |  |  |
| S |
|
| G | G | G |
| S |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | |
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
  |