Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 12 Aligned Residues 295 % Identity 22% Template c3uw3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of an aspartate-semialdehyde dehydrogenase from2 burkholderia thailandensis Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A
Query Conservation
Alig confidence																																															.	.	.	.	.	.														.
Template Conservation																																															.	.	.	.	.	.														.
Template Sequence		M	N	V	G	L	V	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	Q	E	E	G	D	F	D	L	I	E	P	V	F	F	S	T	S	N	A	G	G	K	A	P	S	.	.	.	.	.	.	F	A	K	N	E	T	T	L	K	D	A	T	S	.	I	D	D	L	K	K	C	D	V	I	I	T	C	Q	G
Template Known Secondary structure								S	T	T	S													T	T	G	G	G	G	S							S	S		T	T	S	B			T	.	.	.	.	.	.	T			S			B				T	T		.						T		S						S
Template Predicted Secondary structure																																															.	.	.	.	.	.														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																			.	.																																															.	.	.	.	.
Query SS confidence																			.	.																																															.	.	.	.	.
Query Sequence		H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	.	.	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	.	.	.	.	.	E	A	N	L	I	A	V	P	G	C
Query Conservation																			.	.																																															.	.	.	.	.
Alig confidence																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	Y	T	N	D	V	F	P	K	L	R	A	A	G	W	N	G	Y	W	I	D	A	A	S	S	L	R	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	A	V	I	I	L	D	P	V	N	L	N	V	I	K	D	A	L	V	N	G	T	K	N	F	I	G	G	N	C
Template Known Secondary structure															T	T			S						S	S	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																			T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	.	.	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																									.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		T	V	S	L	M	L	M	A	L	G	G	L	F	R	E	N	L	V	D	W	.	.	.	M	T	A	M	T	Y	Q	A	A	S	G	A	G	A	Q	N	M	R	E	L	L	A	Q	M	G	T	L	N	G	A	V	A	A	Q	L	A	D	P	A	S	A	I	L	D	I	D	R	R	V	L	A	A	M	N	G	D	A
Template Known Secondary structure																T	T					.	.	.							B		G	G	G	T																		T	T					T		T	T	S															S	T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
																	220	.	.	.	.																																	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	P	T	S	Q	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	D	L	G	N	G	M	S	R	E	E	W	K	G	G	A	E	T	N	K	I	L	G	K	P	A	M	G	E	P	G	S	V	P	V	D	G	L	C	V	R	I	G	A	M	R	C	H	S	Q	A	L	T	I	K	L	K	K	D	V	P
Template Known Secondary structure		S			T	T	T	S	S			T	T	S		B	S			S		B		S	S	S		B															T				T	T	S	T	T										B		S		S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																										.	.	.																				.	.	.	.
Query SS confidence																										.	.	.																				.	.	.	.
Query Sequence		Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	V	R	L	Y	D	K	G	.	.	.	V	P	A	L	K	N	V	V	G	L	P	F	C	D	I	G	F	A	V	.	.	.	.	Q	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F
Query Conservation																										.	.	.																				.	.	.	.
Alig confidence																										.	.	.																				.	.	.	.
Template Conservation
Template Sequence		L	D	E	I	N	G	I	L	A	S	A	N	D	W	V	K	V	V	P	N	E	R	E	A	S	M	R	D	L	S	P	A	K	V	T	G	T	L	S	V	P	V	G	R	L	R	K	L	A	M	G	G	E	Y	L	S	A	F	T	V	G	D	Q	L	L	W	G	A	A	E	P	L	R	R	M	L	R	I	L	L
Template Known Secondary structure											T	S		S	S						S	S								S	S					T	T	S	S											T	T		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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