Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 18 Aligned Residues 300 % Identity 15% Template c3sthA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 toxoplasma gondii Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	.	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																									.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		V	C	K	L	G	I	N	G	F	.	G	R	I	G	R	L	V	F	R	A	A	M	E	R	G	D	V	E	V	L	A	I	N	D	P	F	M	S	L	D	Y	M	V	Y	L	L	R	Y	D	S	V	H	G	H	Y	P	G	E	V	S	H	K	D	G	K	L	I	V	G	G	K	A	V	T	V	F	N	E	K	E
Template Known Secondary structure									S		.	S												T		T	T									T	T	S													T	T	T		S		S	S						T	T					T	T									S	S
Template Predicted Secondary structure											.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
			64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K
Query Conservation		.
Alig confidence		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	A	I	P	W	G	Q	A	G	V	H	Y	I	C	E	S	T	G	I	F	L	T	K	E	K	A	Q	A	H	L	T	N	G	A	K	K	V	I	M	S	A	P	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	T	P	M	F	V	M	G	V	N	N	D	Q
Template Known Secondary structure		G	G	G							T								S	S	S			S					G	G	G	G	S	S	S							S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			B			T	T	T	T	G	G	G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																						.	.	.	.	130	.	.	.	.	.	.	.	.	.
		143	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure						.																																								.	.	.	.							.	.
Query SS confidence						.																																								.	.	.	.							.	.
Query Sequence		L	K	E	A	.	N	L	I	A	V	P	G	C	Y	P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	.	.	.	.	V	S	G	A	G	R	.	.	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q
Query Conservation						.																																								.	.	.	.							.	.
Alig confidence						.																																								.	.	.	.							.	.
Template Conservation
Template Sequence		Y	K	S	S	D	V	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L	A	K	I	V	H	D	K	F	G	I	V	E	G	L	M	T	T	V	H	A	M	T	A	N	Q	L	T	V	D	G	P	S	K	G	G	K	D	W	R	A	G	R	S	A	G	V	N	I	I	P	A	S	T	G	A	A	K	A	V
Template Known Secondary structure				T	T																									T															T	T	S		S	S	S				G	G	G			G	G	G	G	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																								.	.	.																							.
Query SS confidence																																																								.	.	.																							.
Query Sequence		P	E	I	A	T	H	L	G	A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	.	.	.	V	R	L	Y	D	K	G	V	P	A	L	K	N	V	V	G	L	P	F	C	D	I	.
Query Conservation																																																								.	.	.																							.
Alig confidence																																																								.	.	.											.												.
Template Conservation																																																																					.
Template Sequence		G	K	I	I	P	S	L	N	G	K	L	T	G	M	A	F	R	V	P	V	P	D	V	S	V	V	D	L	T	C	K	L	A	K	P	A	K	Y	E	D	I	V	A	A	V	K	E	A	A	T	S	G	P	M	K	G	I	I	S	Y	T	D	E	E	V	V	S	.	S	D	F	V	H	C	K	F	S	S	V	F
Template Known Secondary structure					S	G	G	G	T	T	T									S		S	S											S	S																	S	S	T	T	T	T	T						S				G	.	G	G	G	T	T				S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.
						292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	F	A	V	Q	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																				.
Template Conservation																									.
Template Sequence		D	I	N	A	G	I	M	L	N	D	T	F	V	K	L	V	S	W	Y	D	N	E	W	.	G	Y	S	N	R	L	V	E	L	A	H	Y	M
Template Known Secondary structure			T	T	T						T	T										T	T		.
Template Predicted Secondary structure																									.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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