Return to main results Retrieve Phyre Job Id

Job DescriptionP11446
Confidence97.92%DateThu Jan 5 11:32:37 GMT 2012
Rank179Aligned Residues89
% Identity13%Templatec3q2kB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca
Resolution2.13 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30.........40.........50.........60.........70.........80
Predicted Secondary structure 




.



























Query SS confidence 





















.
























































Query Sequence  LNTLIVGASGYAGAELVTYVNR. HPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLAT
Query Conservation 









 

  




  .

   
  
   

   

       
         
             



 
 
Alig confidence 






.













.









..











.......

























Template Conservation 


 


. 
  
               



 ..
           .......            

     
 
 
 
Template Sequence  IRFGLVG. CGRISKNHIGAIAQHGDRAELVEIC. . DTNPEALQAAEA. . . . . . . ATGARPFSSLSDMLAQGNADALVLAT
Template Known Secondary structure 
.
STTTT
TTT..
SS.......

B

SS


S
S
Template Predicted Secondary structure 
.






..


.......












Template SS confidence 















































































   11...... ..20.........30.........40.. .......50.... .....60.........70.........80
 
   81........90.........100
Predicted Secondary structure 







Query SS confidence 



















Query Sequence  AHEVSHDLAPQFLEAGCVVF
Query Conservation      
          
  

Alig confidence 



















Template Conservation 
   
      
   

 

Template Sequence  PSGLHPWQAIEVAQAGRHVV
Template Known Secondary structure 
GGGTT
Template Predicted Secondary structure 





Template SS confidence 



















   81........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions