Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 8 Aligned Residues 312 % Identity 21% Template c3hskB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 with nadp from candida albicans Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		M	L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	.	.	.	.	.	.	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																			.	.														.	.	.	.	.	.																		.
Template Conservation																																			.	.																																					.
Template Sequence		V	K	K	A	G	V	L	G	A	T	G	S	V	G	Q	R	F	I	L	L	L	S	K	H	P	E	F	E	I	H	A	L	G	.	.	A	S	S	R	S	A	G	K	K	Y	K	D	A	A	S	W	K	Q	T	E	T	L	P	E	T	E	Q	D	I	V	V	Q	E	C	K	P	.	E	G	N	F	L	E	C	D
Template Known Secondary structure									T	T	T	S												T		T	T								.	.			T	T	T	T	T	S	B										S	S								T		B				S	S	S	.	S	S	G	G	G	G		S
Template Predicted Secondary structure																																			.	.																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		V	V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	.	.	.	.	.	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	L	I
Query Conservation																																																												.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		V	V	F	S	G	L	D	A	D	V	A	G	D	I	E	K	S	F	V	E	A	G	L	A	V	V	S	N	A	K	N	Y	R	R	E	K	.	.	.	.	.	.	.	.	D	V	P	L	V	V	P	I	V	N	P	E	H	I	D	V	V	E	N	K	V	K	Q	A	V	S	K	G	G	K	K	P	G	F	I	I
Template Known Secondary structure																						T	T							S	S	T	T	T	T		T	.	.	.	.	.	.	.	.	T	S					T	T	T		G	G	G	G														T	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																														.															.	.	.	.	.
Query SS confidence																																																														.															.	.	.	.	.
Query Sequence		A	V	P	G	C	Y	P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	.	F	T	H	R	H	Q	P	E	I	A	T	H	L	G	.	.	.	.	.
Query Conservation																																																														.															.	.	.	.	.
Alig confidence																												.	.															.	.	.	.	.														.															.	.	.	.	.
Template Conservation																												.	.															.	.	.	.	.
Template Sequence		C	I	S	N	C	S	T	A	G	L	V	A	P	L	K	P	L	V	E	K	F	G	P	I	D	A	.	.	L	T	T	T	T	L	Q	A	I	S	P	G	V	S	.	.	.	.	.	G	M	D	I	L	D	N	I	V	P	Y	I	S	G	E	E	D	K	L	E	W	E	T	K	K	I	L	G	G	V	N	A	E
Template Known Secondary structure													T	T														.	.															.	.	.	.	.					T	T			B				T	T													T					T	T
Template Predicted Secondary structure																												.	.															.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
													224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.											270	.	.	.	.	.	.		.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	.	.	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	.	.	.	.	.	.	.	.	.	.	V	R	L	Y	D	K	G	.	V	P	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		G	T	E	F	V	P	I	P	E	S	E	M	K	V	S	A	Q	C	N	R	V	P	V	I	D	G	H	T	E	C	I	S	L	R	F	A	N	R	P	A	P	S	V	E	D	V	K	Q	C	L	R	E	Y	E	C	A	A	S	K	L	G	C	H	S	A	P	K	Q	T	I	H	V	L	D	Q	P	D	R	P	Q
Template Known Secondary structure		S	S	S						T	T	T											S		S	S											S	S	S	S																						T		S	S	S		S	S							S	T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure										.	.	.										.	.
Query SS confidence										.	.	.										.	.
Query Sequence		L	K	N	V	V	G	L	P	.	.	.	F	C	D	I	G	F	A	V	Q	.	.	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F	G	Y	A	E	T	Q	S	L	I
Query Conservation										.	.	.										.	.
Alig confidence										.	.	.										.	.																														.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		P	R	L	D	R	D	R	D	S	G	Y	G	V	S	V	G	R	I	R	E	D	S	L	L	D	F	K	M	V	V	L	S	H	N	T	I	I	G	A	A	G	A	G	I	L	I	A	E	I	L	K	.	.	.	.	A	K	N	I	I
Template Known Secondary structure						T	T	T	T	T	T	S	S										S	S	S	S													S														.	.	.	.		T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360					.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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