Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 14 Aligned Residues 286 % Identity 27% Template c2yv3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase from thermus2 thermophilus hb8 Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	.	.	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A
Query Conservation																								.	.
Alig confidence																								.	.										.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	A	V	V	G	A	T	G	A	V	G	R	E	I	L	K	V	L	E	A	R	N	F	P	L	S	E	L	R	L	Y	.	.	.	A	S	P	R	S	A	G	V	R	L	A	F	R	G	E	E	I	.	.	.	.	.	.	.	.	.	P	V	E	P	L	P	E	G	P	L	P	V	D	L	V	L	A	S
Template Known Secondary structure								T	T	T	S													T	T										.	.	.			G	G	G	S	S						T	T				.	.	.	.	.	.	.	.	.							S	S			S		S
Template Predicted Secondary structure																																			.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	.	L	I	A	V	P	G	C	Y	P	T	A
Query Conservation																																																																						.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	G	G	I	S	R	A	K	A	L	V	W	A	E	G	G	A	L	V	V	D	N	S	S	A	W	R	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	V	P	L	V	V	P	E	V	N	R	E	K	I	F	Q	H	R	G	I	I	A	N	P	N	C	T	T	A	I
Template Known Secondary structure		S		S													T	T							S	T	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		B							G	G	G	G	G	G		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																				.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	F	C	E	V	S	L	Q	P	Y	.	.	G	V	F	T	H	R	H	Q	P	E
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																										.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																										.	.	.
Template Sequence		L	A	M	A	L	W	P	L	H	R	A	F	Q	A	K	R	V	I	V	A	T	Y	Q	A	.	.	.	A	S	G	A	G	A	K	A	M	E	E	L	L	T	E	T	H	R	F	L	H	G	E	A	P	K	A	E	A	F	A	H	P	L	P	F	N	V	I	P	H	I	D	A	F	Q	E	N	G	Y	T	R	E
Template Known Secondary structure											T	T	T											B		.	.	.	G	G	G	T		S															T	T						S	S	S	S	S			T	T			B	S			S		B		T	T	S		B
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
												218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																												.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																												.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	I	A	T	H	L	G	A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	V	R	L	Y	D	K	G	.	.	.	.	V	P	A	L	K	N	V
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																												.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																															.	.	.	.										.	.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		E	M	K	V	V	W	E	T	H	K	I	F	G	D	D	T	I	R	I	S	A	T	A	V	R	V	P	T	L	R	A	H	A	E	A	V	S	V	E	F	A	R	P	V	T	P	E	A	A	R	E	V	L	K	E	A	.	.	.	.	P	G	V	E	V	V	D	E	P	E	A	K	R	Y	P	M	P	L	T	A
Template Known Secondary structure														T		S			B							B		S		S	S											S	S												T	T	S	.	.	.	.	T	T						B	G	G	G	T	B				S	T	T	T
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		284	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		V	G	L	P	F	C	D	I	G	F	A	V	.	.	.	.	Q	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		S	G	K	W	D	V	E	V	G	R	I	R	K	S	L	A	F	E	N	G	L	D	F	F	V	V	G	D	Q	L	L	K	G	A	A	L	N	A	V	Q	I	A	E	E	W	L
Template Known Secondary structure		T	T		S	S										S	S	S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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