Job Description P11446 Confidence 96.37% Date Thu Jan 5 11:32:37 GMT 2012 Rank 415 Aligned Residues 88 % Identity 16% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A
Query Conservation
Alig confidence									.																.								.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation									.																.								.	.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	G	F	L	G	.	L	G	L	M	G	S	G	I	V	S	N	L	L	K	M	.	G	H	T	V	T	V	W	.	.	.	N	R	T	A	E	K	C	D	L	F	I	.	.	.	.	.	.	.	.	.	.	Q	E	G	A	R	L	G	R	T	P	A	E	V	V	S	T	C	D	I	T	F	A	C	V	S
Template Known Secondary structure		S							.		S													T	.	T							.	.	.		S	S	G	G	G	G					.	.	.	.	.	.	.	.	.	.		T	T					S										S							S
Template Predicted Secondary structure									.																.								.	.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.											.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		82	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		H	E	V	S	H	D	L	A	P	Q	F	L	.	.	.	.	.	.	.	E	A	G	C	V	V	F	D	L	S	G
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	K	A	A	K	D	L	V	L	G	P	S	G	V	L	Q	G	I	R	P	G	K	C	Y	V	D	M	S	T
Template Known Secondary structure		S										S	T	T		G	G	G	G			T	T							S
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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