Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 15 Aligned Residues 289 % Identity 22% Template c2qz9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 ii from vibrio cholerae Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A
Query Conservation
Alig confidence																									.																						.	.	.	.	.	.	.	.
Template Conservation																									.																						.	.	.	.	.	.	.	.
Template Sequence		F	N	V	A	I	F	G	A	T	G	A	V	G	E	T	M	L	E	V	L	Q	E	R	.	E	F	P	V	D	E	L	F	L	L	A	S	E	R	S	E	G	K	T	Y	R	.	.	.	.	.	.	.	.	F	N	G	K	T	V	R	V	Q	N	V	E	E	F	D	W	S	Q	V	H	I	A	L	F	S	A	G
Template Known Secondary structure								T	T	T	S													T	.	T												S	S	S	T	T					.	.	.	.	.	.	.	.		T	T								G	G	G			G	G	G		S						S
Template Predicted Secondary structure																									.																						.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	.	.	.	K	L	K	E	A	N	L	I	A	V	P	G	C	Y	P	T	A
Query Conservation																																																														.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	L	S	A	K	W	A	P	I	A	A	E	A	G	V	V	V	I	D	N	T	S	H	F	R	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	I	P	L	V	V	P	E	V	N	P	E	A	I	A	E	F	R	N	R	N	I	I	A	N	P	N	C	S	T	I	Q
Template Known Secondary structure															T	T							S	S	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		B			T	T	T		G	G	G	G	G	G	G	G	T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	.	.	.	.	.	.	.	.	.	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I	A	T	H	L	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence																										.	.	.																			.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		M	L	V	A	L	K	P	I	Y	D	A	V	G	I	E	R	I	N	V	T	T	Y	Q	S	.	.	.	V	S	G	A	G	K	A	G	I	D	E	L	A	G	Q	T	A	K	L	L	N	G	Y	P	A	E	T	N	T	F	S	Q	Q	I	A	F	N	C	I	P	Q	I	D	Q	F	M	D	N	G	Y	T	K	E
Template Known Secondary structure																										.	.	.	G	G	G	G																T	T	T						S	S	S	S	S			T	T			B	S			S		B		T	T	S	S	B
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
																	223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	V	R	L	Y	D	K	G	.	.	V	P	A	L	K	N	V	V	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.										.	.
Template Conservation																																																										.	.	.	.
Template Sequence		E	M	K	M	V	W	E	T	Q	K	I	F	N	D	P	S	I	M	V	N	P	T	C	V	R	V	P	V	F	Y	G	H	A	E	A	V	H	V	E	T	R	A	P	I	D	A	E	Q	V	M	D	M	L	E	Q	T	.	.	.	.	D	G	I	E	L	F	R	G	A	D	F	P	T	Q	V	R	D	A	G	G
Template Known Secondary structure													T	T		T	T									B		S		S	S											S	S													T	S	.	.	.	.	T	T						T	T										T	T
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		286	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		L	P	F	C	D	I	G	F	A	V	Q	G	.	.	.	.	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.
Template Conservation
Template Sequence		K	D	H	V	L	V	G	R	V	R	N	D	I	S	H	H	S	G	I	N	L	W	V	V	A	D	N	V	R	K	G	A	A	T	N	A	V	Q	I	A	E	L	L	V
Template Known Secondary structure			S	S										T	T	S	S	S										T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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