Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 2 Aligned Residues 326 % Identity 37% Template c2q49B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable n-acetyl-gamma-glutamyl-phosphate reductase; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at2g19940 Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A
Query Conservation
Alig confidence																																	.	.	.																														.	.
Template Conservation																																	.	.	.																														.	.
Template Sequence		I	R	I	G	L	L	G	A	S	G	Y	T	G	A	E	I	V	R	L	L	A	N	H	P	H	F	Q	V	T	L	M	.	.	.	T	A	D	R	K	A	G	Q	S	M	E	S	V	F	P	H	L	R	A	Q	K	L	P	T	L	V	S	V	K	.	.	D	A	D	F	S	T	V	D	A	V	F	C	C	L	P
Template Known Secondary structure									T	T	S												T		S	S							.	.	.			G	G	G	T	T	S		G	G	G	T		G	G	G	T	T	S						B		T	T	.	.	T	S		T	T	S		S
Template Predicted Secondary structure																																	.	.	.																														.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	L	I	A	V	P	G	C	Y	P	T	A	A	Q	L
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		H	G	T	T	Q	E	I	I	K	E	L	.	P	T	A	L	K	I	V	D	L	S	A	D	F	R	L	R	N	I	A	E	Y	E	E	W	Y	G	Q	P	H	K	A	V	E	L	Q	K	E	V	V	Y	G	L	T	E	I	L	R	E	D	I	K	K	A	R	L	V	A	N	P	G	C	Y	P	T	T	I	Q	L
Template Known Secondary structure		T	T	S							T	S	.		S	S							S	S	T	T	T		S										S	S			S						T	T																	S
Template Predicted Secondary structure													.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																										.	.																							.	.	.	.	.	.
Query SS confidence																																										.	.																							.	.	.	.	.	.
Query Sequence		A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	.	.	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I	A	T	H	L	G	.	.	.	.	.	.	A	D	V	I	F	T	P	H	L	G
Query Conservation																																										.	.																							.	.	.	.	.	.
Alig confidence																			.																							.	.																							.	.	.	.	.	.
Template Conservation																			.
Template Sequence		P	L	V	P	L	L	K	A	N	L	I	K	H	E	N	I	I	.	I	D	A	K	S	G	V	S	G	A	G	R	G	A	K	E	A	N	L	Y	S	E	I	A	E	G	I	S	S	Y	G	V	T	R	H	R	H	V	P	E	I	E	Q	G	L	S	D	V	A	Q	S	K	V	T	V	S	F	T	P	H	L	M
Template Known Secondary structure									T	T		B		S	S	S			.							G	G	G	G		S				G	G	G						T	T						S		S			T														T	S
Template Predicted Secondary structure																			.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																													.																					.	.
Query SS confidence																																													.																					.	.
Query Sequence		N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	V	R	L	Y	D	K	G	.	V	P	A	L	K	N	V	V	G	L	P	F	C	D	I	G	F	A	V	Q	.	.	G	E	H	L	I	I	V	A	T	E	D	N	L	L
Query Conservation																																													.																					.	.
Alig confidence																																													.																					.	.
Template Conservation
Template Sequence		P	M	I	R	G	M	Q	S	T	I	Y	V	E	M	A	P	G	V	R	T	E	D	L	H	Q	Q	L	K	T	S	Y	E	D	E	E	F	V	K	V	L	D	E	G	V	V	P	R	T	H	N	V	R	G	S	N	Y	C	H	M	S	V	F	P	D	R	I	P	G	R	A	I	I	I	S	V	I	D	N	L	V
Template Known Secondary structure		S	S	S	S										B		T	T															S	S		S	S						T	T					G	G	G	G	S	S	S	S										S	S	T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F	G	Y	A	E	T	Q	S	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	A	S	G	Q	A	L	Q	N	L	N	I	M	L	G	Y	P	E	T	T	G	L	L
Template Known Secondary structure		T	T	T												T	T	S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions