Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 30 Aligned Residues 297 % Identity 13% Template c2pkrI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase aor; PDBTitle: crystal structure of (a+cte)4 chimeric form of2 photosyntetic glyceraldehyde-3-phosphate dehydrogenase,3 complexed with nadp Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																											.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	.	.	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																	.	.																					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																							.	.
Template Sequence		L	K	V	A	I	N	G	F	.	G	R	I	G	R	N	F	L	R	C	W	H	G	R	K	D	S	P	L	D	V	V	V	I	N	D	T	G	G	V	K	Q	A	S	H	L	L	K	.	.	Y	D	S	I	L	G	T	F	D	A	D	V	K	T	A	G	D	S	A	I	S	V	D	G	K	V	I	K	V	V	S
Template Known Secondary structure										.	S												T		S	S		S									T	T											.	.			T	T	T		S		S	S						T	T	S					T	T
Template Predicted Secondary structure										.																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
				62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C
Query Conservation		.	.
Alig confidence		.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	N	P	V	N	L	P	W	G	D	M	G	I	D	L	V	I	E	G	T	G	V	F	V	D	R	D	G	A	G	K	H	L	Q	A	G	A	K	K	V	L	I	T	A	P	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	I	P	T	Y	V	V	G	V	N
Template Known Secondary structure			S		G	G	G	S						T								S	S	S			B					T					T	T		S					S	S			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			B			T	T	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																						.	.	.	.	.	.	130	.	.	.	.
		140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure										.																																									.	.	.
Query SS confidence										.																																									.	.	.
Query Sequence		G	N	K	L	K	E	A	N	.	L	I	A	V	P	G	C	Y	P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	.	.	.	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q
Query Conservation										.																																									.	.	.
Alig confidence										.																																									.	.	.
Template Conservation
Template Sequence		E	E	G	Y	T	H	A	D	T	I	I	S	N	A	S	C	T	T	N	C	L	A	P	F	V	K	V	L	D	Q	K	F	G	I	I	K	G	T	M	T	T	T	H	S	Y	T	G	D	Q	R	L	L	D	A	S	H	R	D	L	R	R	A	R	A	A	C	L	N	I	V	P	T	S	T	G	A	A	K	A	V
Template Known Secondary structure		G	G	G			T	T		S																							T															T	T	S		S	S	S				S	S	T	T	T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																							.	.																								.	.
Query SS confidence																																																							.	.																								.	.
Query Sequence		P	E	I	A	T	H	L	G	A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	.	.	L	V	R	L	Y	D	K	G	V	P	A	L	K	N	V	V	G	L	P	F	C	D	I	.	.
Query Conservation																																																							.	.																								.	.
Alig confidence																																																							.	.												.												.	.
Template Conservation																																																																				.
Template Sequence		A	L	V	L	P	N	L	K	G	K	L	N	G	I	A	L	R	V	P	T	P	N	V	S	V	V	D	L	V	V	Q	V	S	K	K	T	F	A	E	E	V	N	A	A	F	R	E	S	A	D	N	E	L	K	G	I	L	S	V	C	D	E	P	L	V	S	.	I	D	F	R	C	T	D	V	S	S	T	I	D
Template Known Secondary structure						G	G	G	T	T	T									S		S	S											S	S																	T	T	T	T	T	T						S				G	.	G	G	G	T	T		S	S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.
					292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	F	A	V	Q	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R
Query Conservation		.	.	.
Alig confidence		.	.	.																				.
Template Conservation																								.
Template Sequence		S	S	L	T	M	V	M	G	D	D	M	V	K	V	I	A	W	Y	D	N	E	W	.	G	Y	S	Q	R	V	V	D	L	A	D	I	V
Template Known Secondary structure		G	G	G					T	T	T										T	T		.
Template Predicted Secondary structure																								.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions