Job Description P11446 Confidence 98.16% Date Thu Jan 5 11:32:37 GMT 2012 Rank 156 Aligned Residues 132 % Identity 16% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A	H
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		R	F	V	I	L	G	.	F	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N	D	F	L	I	D	V	S	I	G
Template Known Secondary structure								.		S														B				G	G	G						S	S			S								T										T	T	T					T	G	G	G			T	T								S	S
Template Predicted Secondary structure								.
Template SS confidence
		15	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	L	I	A	V	P	G	C
Query Conservation
Alig confidence																							.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	.	.	T	E	P	W	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	T	H
Template Known Secondary structure		S													T						S	S	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	T	T	T			S					S
Template Predicted Secondary structure																							.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120																		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions