Return to main results Retrieve Phyre Job Id

Job DescriptionP11446
Confidence98.48%DateThu Jan 5 11:32:37 GMT 2012
Rank121Aligned Residues99
% Identity15%Templatec2jcyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:1-deoxy-d-xylulose 5-phosphate reductoisomerase; PDBTitle: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase, dxr, rv2870c, from mycobacterium3 tuberculosis
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20...... ...30.........40......... 50.........60.........70
Predicted Secondary structure 







.







..........











Query SS confidence 
























.






















. . . . . . . . . .




















Query Sequence  LNTLIVGASGYAGAELVTYVNRHPH. MNITALTVSAQSNDAGKLISDLH. . . . . . . . . . PQLKGIVDLPLQPMSDISEFS
Query Conservation 









 

  




  

 .  
  
   

   

       ..........
         
          
Alig confidence 
























.






















..........




















Template Conservation 


 








  

 

    
 
 





  

   
      
 
  
 
 
      
      
      
 
Template Sequence  LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATRLV
Template Known Secondary structure  STTS
TTT
SS




SS


SSTT
Template Predicted Secondary structure 































Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   71........80.........90.........100
Predicted Secondary structure  ..












Query SS confidence  . .





























Query Sequence  . . PGVDVVFLATAHEVSHDLAPQFLEAGCVVF
Query Conservation  ..   



 
     
          
  

Alig confidence  ..





























Template Conservation      




 

 
 


  

 

  

 

Template Sequence  EQTEADVVLNALVGALGLRPTLAALKTGARLA
Template Known Secondary structure  S

S


GGGGTT
Template Predicted Secondary structure 











Template SS confidence 































   93......100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions