Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 16 Aligned Residues 293 % Identity 25% Template c2hjsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:usg-1 protein homolog; PDBTitle: the structure of a probable aspartate-semialdehyde dehydrogenase from2 pseudomonas aeruginosa Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	.	.	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A
Query Conservation																									.	.
Alig confidence																									.	.									.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.												.	.	.	.	.	.	.	.
Template Sequence		L	N	V	A	V	V	G	A	T	G	S	V	G	E	A	L	V	G	L	L	D	E	R	D	F	P	L	H	R	L	H	L	L	.	.	.	A	S	A	E	S	A	G	Q	R	X	G	.	.	.	.	.	.	.	.	F	A	E	S	S	L	R	V	G	D	V	D	S	F	D	F	S	S	V	G	L	A	F	F	A
Template Known Secondary structure								T	T	T	S													T	T				S						.	.	.			T	T	T	T	T					.	.	.	.	.	.	.	.		T	T								G	G	G			G	G	G		S
Template Predicted Secondary structure																																			.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	L	I	A	V	P	G	C	Y	P	T	A	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	A	E	V	S	R	A	H	A	E	R	A	R	A	A	G	C	S	V	I	D	L	S	G	A	L	E	P	S	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	V	X	V	S	V	N	A	E	R	L	A	S	Q	A	A	P	F	L	L	S	S	P	C	A	V	A	A	E	L
Template Known Secondary structure		S															T	T						T	T		T	T	T	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B							G	G	G	G	G	G	S		S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.															.	.	.	.	.	210	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	Y	G	V	F	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		C	E	V	L	A	P	L	L	A	T	L	D	C	R	Q	.	.	.	L	N	L	T	A	C	L	S	V	S	S	L	G	R	E	G	V	K	E	L	A	R	Q	T	A	E	L	L	N	A	R	P	L	E	P	R	L	F	D	R	Q	I	A	F	N	L	L	A	Q	V	G	A	V	D	A	E	G	H	S	A	I	E
Template Known Secondary structure									T	T	T						.	.	.									G	G	G	G																	T	T						S	S	S	S	S			T	T			B	S	S	S	S		B		T	T	S		B
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
						213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280		.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																																	.					.
Query SS confidence		.	.	.	.																																																																	.					.
Query Sequence		.	.	.	.	R	H	Q	P	E	I	A	T	H	L	G	A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	K	P	L	V	R	L	Y	D	K	G	.	V	P	A	L	.	K	N	V	V	G	L
Query Conservation		.	.	.	.																																																																	.					.
Alig confidence		.	.	.	.																																																				.	.	.	.										.					.
Template Conservation																																																									.	.	.	.
Template Sequence		R	R	I	F	A	E	V	Q	A	L	L	G	E	R	I	G	P	L	N	V	T	C	I	Q	A	P	V	F	F	G	D	S	L	S	V	T	L	Q	C	A	E	P	V	D	L	A	A	V	T	R	V	L	D	A	T	.	.	.	.	K	G	I	E	W	V	G	E	G	D	Y	P	T	V	V	G	D	A	L	G	Q
Template Known Secondary structure												T	G	G	G	B											S		S	S											S	S														S	.	.	.	.	T	T						T	T										T	T	S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		P	F	C	D	I	G	F	A	V	Q	G	.	.	.	.	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F	G	Y	A	E	T	Q	S	L
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.																													.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		D	E	T	Y	V	G	R	V	R	A	G	Q	A	D	P	C	Q	V	N	L	W	I	V	S	D	N	V	R	K	G	A	A	L	N	A	V	L	L	G	E	L	L	I	.	.	.	.	K	H	Y	L
Template Known Secondary structure		S											S	S		T	T																												.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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