Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 6 Aligned Residues 313 % Identity 22% Template c2ep5B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:350aa long hypothetical aspartate-semialdehyde PDBTitle: structural study of project id st1242 from sulfolobus tokodaii strain7 Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	.	.	.	.	.	.	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V
Query Conservation																																																							.	.	.	.	.	.
Alig confidence																																		.	.																				.	.	.	.	.	.											.	.
Template Conservation																																		.	.																																				.	.
Template Sequence		I	K	V	S	L	L	G	S	T	G	M	V	G	Q	K	M	V	K	M	L	A	K	H	P	Y	L	E	L	V	K	V	S	.	.	A	S	P	S	K	I	G	K	K	Y	K	D	A	V	K	W	I	E	Q	G	D	I	P	E	E	V	Q	D	L	P	I	V	S	T	N	.	.	Y	E	D	H	K	D	V	D	V
Template Known Secondary structure								T	T	T	S											T	T		S	S								.	.			G	G	G	T	T	S	B	G	G	G	T					S	S	S	S			T	T	T	T	T		B				S	S	.	.	G	G	G	T	T	T		S
Template Predicted Secondary structure																																		.	.																																				.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	L	I	A	V	P	G	C	Y
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		V	L	S	A	L	P	N	E	L	A	E	S	I	E	L	E	L	V	K	N	G	K	I	V	V	S	N	A	S	P	F	R	M	D	P	.	.	.	.	.	.	.	.	D	V	P	L	I	N	P	E	I	N	W	E	H	L	E	L	L	K	F	Q	K	E	R	K	G	W	K	G	I	L	V	K	N	P	N	C	T
Template Known Secondary structure																					T	T							S	S	T	T	T	T		T	.	.	.	.	.	.	.	.	T	S		B							G	G	G	G	G	G	G	G	T						T		S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I	A	T	H	L	G	A	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.						.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.						.
Template Sequence		A	A	I	M	S	M	P	I	K	P	L	I	E	I	A	T	K	S	K	I	I	I	T	T	L	Q	A	.	.	.	V	S	G	A	G	.	Y	N	G	I	S	F	M	A	I	E	G	N	I	I	P	Y	I	K	G	E	E	D	K	I	A	K	E	L	T	K	L	N	G	K	L	E	N	N	Q	I	I	P	A	N
Template Known Secondary structure										G	G	G						T	S										.	.	.	G	G	G	G		.	T	T	S	S						T	T			B				T	T													T					S	S	S
Template Predicted Secondary structure																													.	.	.						.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
			225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.												.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence		.																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		.	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	.	.	.	.	.	.	.	.	.	.	.	H	K	P	L	V	R	L	Y	D	K	G	V	P	A	L	.	.	.	K	N	V	V	G	L	P	F	C
Query Conservation		.																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence		.																																										.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		L	D	S	T	V	T	S	I	R	V	P	T	R	V	G	H	M	G	V	I	N	I	V	T	N	E	R	I	N	I	E	E	I	K	K	T	L	K	N	F	K	S	L	P	Q	Q	K	N	L	P	T	A	P	K	Q	P	I	I	V	R	D	E	E	D	R	P	Q	P	I	I	D	V	N	A	E	S	G	M	A	V
Template Known Secondary structure												S		S	S											S	S													T								T	T		T	T			S	S	S						S	T	T								T	T					T	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		D	I	G	F	A	V	.	Q	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F	G	Y	A	E	T	Q	S	L	I
Query Conservation								.
Alig confidence								.																															.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		T	V	G	R	I	R	H	E	N	N	V	L	R	L	V	V	L	G	D	N	L	V	R	G	A	A	G	I	T	I	L	T	V	E	V	M	K	.	.	.	.	E	L	G	Y	I
Template Known Secondary structure										T	T										T	T	T	T	T	T													.	.	.	.		T	T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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