Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 9 Aligned Residues 314 % Identity 24% Template c1ys4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: structure of aspartate-semialdehyde dehydrogenase from2 methanococcus jannaschii Resolution 2.29 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	.	.	.	.	.	.	I	V	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P	G	V	D	V
Query Conservation																																																							.	.	.	.	.	.
Alig confidence																																		.	.																				.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		I	K	V	G	V	L	G	A	T	G	S	V	G	Q	R	F	V	Q	L	L	A	D	H	P	X	F	E	L	T	A	L	A	.	.	A	S	E	R	S	A	G	K	K	Y	K	D	A	C	Y	W	F	Q	D	R	D	I	P	E	N	I	K	D	X	V	V	I	P	T	D	P	K	H	E	E	F	E	D	V	D	I
Template Known Secondary structure								T	T	T	S											T	T		S	S								.	.			T	T	T	T	T	S	B					S					S	S								T		B				S		T	T	S	G	G	G	T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K	E	A	N	L	I	A	V	P	G	C	Y
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		V	F	S	A	L	P	S	D	L	A	K	K	F	E	P	E	F	A	K	E	G	K	L	I	F	S	N	A	S	A	Y	R	X	E	E	.	.	.	.	.	.	.	.	D	V	P	L	V	I	P	E	V	N	A	D	H	L	E	L	I	E	I	Q	R	E	K	R	G	W	D	G	A	I	I	T	N	P	N	C	S
Template Known Secondary structure																					T	T								S	T	T	T	T		T	.	.	.	.	.	.	.	.	T	S		B							G	G	G	G	G												S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.													.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I	A	T	H	L	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.						.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.						.
Template Sequence		T	I	C	A	V	I	T	L	K	P	I	X	D	K	F	G	L	E	A	V	F	I	A	T	X	Q	A	.	.	.	V	S	G	A	G	.	Y	N	G	V	P	S	X	A	I	L	D	N	L	I	P	F	I	K	N	E	E	E	K	X	Q	T	E	S	L	K	L	L	G	T	L	K	D	G	K	V	E	L	A	N
Template Known Secondary structure																			S								B		.	.	.	S	G	G	G		.	T	T	T	S						T	T			B	S			T	T													T	S				T	T
Template Predicted Secondary structure																													.	.	.						.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.											.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.		.	.	290	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.														.												.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.														.												.
Query Sequence		A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	.	.	.	.	.	.	.	.	.	.	Y	A	H	K	P	L	V	R	L	Y	D	K	G	.	V	P	A	L	K	N	V	V	G	L	P	.	F	C	D	I
Query Conservation																																										.	.	.	.	.	.	.	.	.	.														.												.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.														.												.
Template Conservation
Template Sequence		F	K	I	S	A	S	C	N	R	V	A	V	I	D	G	H	T	E	S	I	F	V	K	T	K	E	G	A	E	P	E	E	I	K	E	V	X	D	K	F	D	P	L	K	D	L	N	L	P	T	Y	A	K	P	I	V	I	R	E	E	I	D	R	P	Q	P	R	L	D	R	N	E	G	N	G	X	S	I	V	V
Template Known Secondary structure										B		S		S	S											S	S																T	T	T	T	S			T	T				S						S	T	T								T	T	G	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		292	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		G	F	A	V	Q	.	.	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R	F	G	Y	A	E	T	Q	S	L
Query Conservation							.	.
Alig confidence							.	.																														.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		G	R	I	R	K	D	P	I	F	D	V	K	Y	T	A	L	E	H	N	T	I	R	G	A	A	G	A	S	V	L	N	A	E	Y	F	V	.	.	.	.	K	K	Y	I
Template Known Secondary structure								S	S	S	S									T	T	T	T	T	T													.	.	.	.			T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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