Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 43 Aligned Residues 300 % Identity 14% Template c1obfO_ PDB info PDB header:glycolytic pathway Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: the crystal structure of glyceraldehyde 3-phosphate2 dehydrogenase from alcaligenes xylosoxidans at 1.73 resolution. Resolution 1.7 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	.	.	.	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.															.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		I	R	V	A	I	N	G	.	Y	G	R	I	G	R	N	I	L	R	A	H	Y	E	G	G	K	S	H	D	I	E	I	V	A	I	N	D	L	G	D	P	K	T	N	A	H	L	T	R	Y	D	T	A	H	G	K	F	P	G	T	V	S	V	N	G	S	Y	M	V	V	N	G	D	K	I	R	V	D	A	N	R
Template Known Secondary structure									.		S													T	T	S		S	S									S	S													T	T	T				S	S						T	T					T	T									S
Template Predicted Secondary structure									.
Template SS confidence
		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	S	D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N
Query Conservation
Alig confidence																																									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	A	Q	L	P	W	G	A	L	K	V	D	V	V	L	E	C	T	G	F	F	T	T	K	E	K	A	G	A	H	I	K	G	G	A	K	K	V	.	I	I	S	A	P	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	D	A	T	V	V	Y	G	V	N	H	G
Template Known Secondary structure			G	G	G	S		T	T	T	T	T		S						S	S	S			S											T		S			.			S	S				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S					T	T	T	S	G	G
Template Predicted Secondary structure																																									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.																				.	.	130	.	.	.	.	.	.	.	.	.	140
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		K	L	K	E	A	N	L	I	A	V	P	G	C	Y	P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	.	.	.	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I
Query Conservation																																																.	.	.
Alig confidence																																																.	.	.
Template Conservation
Template Sequence		T	L	K	S	T	D	T	V	I	S	N	A	S	T	T	N	C	L	A	P	L	V	K	P	L	N	D	K	L	G	L	Q	D	G	L	M	T	T	V	H	A	Y	T	N	N	Q	V	L	T	D	V	Y	H	E	D	L	R	R	A	R	S	A	T	M	S	M	I	P	T	K	T	G	A	A	A	A	V	G	D	V
Template Known Secondary structure		G			T	T																								T															T	T	S		S	S					S	S	T	T	T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.
Predicted Secondary structure																																																		.	.																										.	.	.	.
Query SS confidence																																																		.	.																										.	.	.	.
Query Sequence		A	T	H	L	G	A	D	V	I	F	T	P	H	L	G	N	F	P	R	G	I	L	E	T	I	T	C	R	L	K	S	G	V	T	Q	A	Q	V	A	Q	V	L	Q	Q	A	Y	A	H	.	.	K	P	L	V	R	L	Y	D	K	G	V	P	A	L	K	N	V	V	G	L	P	F	C	D	I	.	.	.	.	G
Query Conservation																																																		.	.																										.	.	.	.
Alig confidence																																																		.	.														.												.	.	.	.
Template Conservation																																																																	.
Template Sequence		L	P	E	L	D	G	K	L	N	G	Y	A	I	R	V	P	T	I	N	V	S	I	V	D	L	S	F	V	A	K	R	N	T	T	V	E	E	V	N	G	I	L	K	A	A	S	E	G	E	L	K	G	I	L	D	Y	N	T	E	P	L	V	S	.	V	D	Y	N	H	D	P	A	S	S	T	V	D	A	S	L
Template Known Secondary structure			G	G	G	T	T	S									S		S	S											S	S																	T	T	T	T	T	T						S				G	.	G	G	G	T	T				S					G	G	G
Template Predicted Secondary structure																																																																	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	V	Q	G	E	H	L	I	I	V	A	T	E	D	N	L	L	K	G	A	A	A	Q	A	V	Q	C	A	N	I	R
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		T	K	V	S	G	R	L	V	K	V	S	S	W	Y	D	N	E	W	.	G	F	S	N	R	M	L	D	T	T	V	A	L
Template Known Secondary structure						T	T										T	T		.
Template Predicted Secondary structure																				.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions