Job Description P11446 Confidence 97.70% Date Thu Jan 5 11:32:37 GMT 2012 Rank 208 Aligned Residues 98 % Identity 19% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.											.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	.	.	.	.	.	.	.	.	.	.	D	L	P	L	Q	P	M	S	D	I	S	E	F	S	P
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.
Alig confidence									.																.								.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation									.																.								.	.	.
Template Sequence		M	R	I	S	I	F	G	.	L	G	Y	V	G	A	V	C	A	G	C	L	S	A	R	.	G	H	E	V	I	G	V	.	.	.	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L
Template Known Secondary structure									.		S	T	T											T	.	T							.	.	.		S										T	T			S	S			T	T											T	T						S
Template Predicted Secondary structure									.																.								.	.	.
Template SS confidence
		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.															.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		G	V	D	V	V	F	L	A	T	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	S	H	D	L	A	P	Q	F	L	E	A	.	.	G	C	V	V	F	D	L	S	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		D	S	D	V	S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T
Template Known Secondary structure		T		S										B		T	T	S	S	B																	T	T			S								S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions