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Job DescriptionP11446
Confidence100.00%DateThu Jan 5 11:32:37 GMT 2012
Rank7Aligned Residues300
% Identity15%Templatec1mb4B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 from vibrio cholerae with nadp and s-methyl-l-cysteine3 sulfoxide
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLATA
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Template Sequence  MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPN. . . . . FGKDAGMLHDAFD. . IESLKQLDAVITCQG
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STTSTTGGGTSSS
TTSB


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B
TT
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S
S
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   1........10.........20.........30.........40..... ....50........ .60.........70...
 
   82.......90........ .100.........110.........120.........130.........140.........150.........
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Query Sequence  HEVSHDLAPQFLEAGCV. . VFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAA
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Template Sequence  GSYTEKVYPALRQAGWKGYWIDAASTLRMDK. . . . . . . . EAIITLDPVN. . . . . . LKQILHGIHHGTKTFVGGNCTVSLM
Template Known Secondary structure  TT

SSSSTTTT
T........T

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   74.....80.........90.........100.... .....110.... .....120.........130.........
 
   160.........170.........180.........190........ .200.........210.........220.
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Query Sequence  QLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS. . . . . . . . . . . FCEVSLQPYGVFTHRHQPEIATH. . . . . . .
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Template Sequence  LMALGGLYERGLVEW. . . MSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGSFPTDN
Template Known Secondary structure  TT
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GGGG

TTS
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TT
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   140.........150.... .....160.........170.........180.........190.........200.........210......
 
   222.......230.........240.........250.........260.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQ
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Template Sequence  FGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEIEEMIA
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TTS
BS

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BT
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   217..220.........230.........240.........250.........260.........270.........280.........290......
 
   262.......270..... ....280.........290..... ....300.........310.........320.....
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Query Sequence  QAYAHKPLVRLYDK. . . GVPALKNVVGLPFCDIGFAV. . . . QGEHLIIVATEDNLLKGAAAQAVQCANIRF
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Template Sequence  THNDWVKVIPNERDITARELTPAKVTGTLSVPVGRLRKMAMGDDFLNAFTVGDQLLWGAAEPLRRTLRIIL
Template Known Secondary structure  TT
SS

S
SSTTS

TTTTTTTT
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   297..300.........310.........320.........330.........340.........350.........360.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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