Job Description P11446 Confidence 100.00% Date Thu Jan 5 11:32:37 GMT 2012 Rank 23 Aligned Residues 303 % Identity 16% Template c1cerC_ PDB info PDB header:oxidoreductase (aldehyde(d)-nad(a)) Chain: C: PDB Molecule:holo-d-glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: determinants of enzyme thermostability observed in the2 molecular structure of thermus aquaticus d-glyceraldehyde-3 3-phosphate dehydrogenase at 2.5 angstroms resolution Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																		.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	T	L	I	V	G	A	S	G	Y	A	G	A	E	L	V	T	Y	V	N	R	H	P	H	M	N	I	T	A	L	T	V	S	A	Q	S	N	D	A	G	K	L	I	S	D	L	H	P	Q	L	K	G	I	V	D	L	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	M	S
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.															.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.															.
Template Sequence		M	K	V	G	I	N	G	F	.	G	R	I	G	R	Q	V	F	R	I	L	H	S	R	.	G	V	E	V	A	L	I	N	D	L	T	D	N	K	T	L	A	H	L	L	K	Y	D	S	I	Y	H	R	F	P	G	E	V	A	Y	D	D	Q	Y	L	Y	V	D	G	K	A	I	R	A	T	A	V	K	D	P	K
Template Known Secondary structure										.	S													T	.	T									S	S													T	T	T		S		S	S						S	S					T	T									S		G	G
Template Predicted Secondary structure										.															.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	E	F	S	P	G	V	D	V	V	F	L	A	T	A	H	E	V	S	H	D	L	A	P	Q	F	L	E	A	G	C	V	V	F	D	L	S	G	A	F	R	V	N	D	A	T	F	Y	E	K	Y	Y	G	F	T	H	Q	Y	P	E	L	L	E	Q	A	A	Y	G	L	A	E	W	C	G	N	K	L	K
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	P	W	A	E	A	G	V	G	V	V	I	E	S	T	G	V	F	T	D	A	D	K	A	K	A	H	L	E	G	G	A	K	K	V	I	I	T	A	P	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	D	I	T	I	V	M	G	V	N	H	E	A	Y	D
Template Known Secondary structure		G	S						T								S	S	S			B					G	G	G	G	G	G	T		S					S	S			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S					T	T	T	S	G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		145	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																										.	.	.
Query SS confidence				.	.																																										.	.	.
Query Sequence		E	A	.	.	N	L	I	A	V	P	G	C	Y	P	T	A	A	Q	L	A	L	K	P	L	I	D	A	D	L	L	D	L	N	Q	W	P	V	I	N	A	T	S	G	V	S	.	.	.	G	A	G	R	K	A	A	I	S	N	S	F	C	E	V	S	L	Q	P	Y	G	V	F	T	H	R	H	Q	P	E	I	A
Query Conservation				.	.																																										.	.	.
Alig confidence				.	.																																										.	.	.
Template Conservation
Template Sequence		P	S	R	H	H	I	I	S	N	A	S	C	T	T	N	S	L	A	P	V	M	K	V	L	E	E	A	F	G	V	E	K	A	L	M	T	T	V	H	S	Y	T	N	D	Q	R	L	L	D	L	P	H	K	D	L	R	R	A	R	A	A	A	I	N	I	I	P	T	T	T	G	A	A	K	A	T	A	L	V	L
Template Known Secondary structure		T	T	T									T	T															T															T	T	S	B	S	S	S				S	S	T	T	T	T	S	B	G	G	G
Template Predicted Secondary structure
Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions