Return to main results Retrieve Phyre Job Id

Job DescriptionP11446
Confidence96.59%DateThu Jan 5 11:32:37 GMT 2012
Rank379Aligned Residues82
% Identity13%Templatec1b8vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20..... ....30.........40.. .......50.........60.........70....
Predicted Secondary structure 






...







....
















Query SS confidence 























. . .
















. . . .































Query Sequence  LNTLIVGASGYAGAELVTYVNRHP. . . HMNITALTVSAQSNDAG. . . . KLISDLHPQLKGIVDLPLQPMSDISEFSPGVD
Query Conservation 









 

  




  

...   
  
   

   

....       
         
             
Alig confidence 























...
















....































Template Conservation   

 



 
 

  

  
    
       

 
 
     
   
 
 
 

   
        
          

Template Sequence  MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDAD
Template Known Secondary structure  STTSTTTTT
TT



S
TTT
TTS
TTT
S
Template Predicted Secondary structure 




























Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   75....80...
Predicted Secondary structure 



Query SS confidence 








Query Sequence  VVFLATAHE
Query Conservation 


 
    
Alig confidence 








Template Conservation 






  
Template Sequence  VALLVGARP
Template Known Secondary structure 




Template Predicted Secondary structure 




Template SS confidence 








   86...90....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions